|
Supercomputer users in authors list(Japanese) |
Supercomputer users in authors list |
Title |
Journal, Volume, Number, Pages |
PMID |
DOI |
| 1 |
石橋 知彦 |
Tomohiko Ishibashi |
Aryl hydrocarbon receptor is essential for the pathogenesis of pulmonary arterial hypertension |
Proc Natl Acad Sci U S A. 2021 Mar 16;118(11):e2023899118. |
33836606 |
doi: 10.1073/pnas.2023899118. |
| 2 |
平瀬 祥太朗, 岩崎 渉 |
Shotaro Hirase, Wataru Iwasaki |
Integrative genomic phylogeography reveals signs of mitonuclear incompatibility in a natural hybrid goby population |
Evolution. 2021 Jan;75(1):176-194. |
33165944 |
doi: 10.1111/evo.14120. |
| 3 |
Ravinet Mark, 石川 麻乃 |
Mark Ravinet,Asano Ishikawa |
Patterns of genomic divergence and introgression between Japanese sticklebackspecies with overlapping breeding habitats. |
J Evol Biol. 2021 Jan;34(1):114-127. |
32557887 |
doi: 10.1111/jeb.13664. |
| 4 |
西原 昌宏 |
Masahiro Nishihara |
Identification and characterization of xanthone biosynthetic genes contributing to the vivid red coloration of red-flowered gentian |
The Plant journal : for cell and molecular biology. 2021 Sep;107(6):1711-1723. |
34245606 |
doi: 10.1111/tpj.15412 |
| 5 |
齋藤 裕 |
Yutaka Saito |
Evotuning protocols for Transformer-based variant effect prediction on multi-domain proteins |
Briefings in bioinformatics. 2021 Nov 5;22(6):bbab234. |
34180966 |
doi: 10.1093/bib/bbab234 |
| 6 |
江副 晃洋 |
Akihiro Ezoe |
Degree of Functional Divergence in Duplicates Is Associated with Distinct Roles in Plant Evolution |
Molecular biology and evolution. 2021 Apr 13;38(4):1447-1459. |
33290522 |
doi: 10.1093/molbev/msaa302 |
| 7 |
安井 康夫 |
Yasuo Yasui |
Targeted amplicon sequencing + next-generation sequencing–based bulked segregant analysis identified genetic loci associated with preharvest sprouting tolerance in common buckwheat (Fagopyrum esculentum) |
BMC plant biology. 2021 Jan 6;21(1):18. |
33407135 |
doi: 10.1186/s12870-020-02790-w |
| 8 |
鈴木 啓道 |
Hiromichi Suzuki |
The transcriptional landscape of Shh medulloblastoma |
Nature communications. 2021 Mar 19;12(1):1749. |
33741928 |
doi: 10.1038/s41467-021-21883-0 |
| 9 |
鈴木 郁夫 |
Ikuo K Suzuki |
1q21.1 distal copy number variants are associated with cerebral and cognitive alterations in humans |
Translational psychiatry. 2021 Mar 22;11(1):182. |
33753722 |
doi: 10.1038/s41398-021-01213-0 |
| 10 |
齋藤 裕 |
Yutaka Saito |
Rational thermostabilisation of four-helix bundle dimeric de novo proteins |
Scientific reports. 2021 Apr 6;11(1):7526. |
33824364 |
doi: 10.1038/s41598-021-86952-2 |
| 11 |
齋藤 裕 |
Yutaka Saito |
Comparative analysis of the relationship between translation efficiency and sequence features of endogenous proteins in multiple organisms |
Genomics. 2021 Jul;113(4):2675-2682. |
34058272 |
doi: 10.1016/j.ygeno.2021.05.037 |
| 12 |
山口 暢俊, 稲垣 宗一 |
Nobutoshi Yamaguchi, Soichi Inagaki |
H3K27me3 demethylases alter HSP22 and HSP17.6C expression in response to recurring heat in Arabidopsis |
Nature communications. 2021 Jun 9;12(1):3480. |
34108473 |
doi: 10.1038/s41467-021-23766-w |
| 13 |
村越 祐美, 高尾 祥丈 |
Yumi Murakoshi, Yoshitake Takao |
Draft Genome Sequence of Sicyoidochytrium minutum DNA Virus Strain 001 |
Microbiology resource announcements. 2021 Jun 10;10(23):e0041821. |
34110234 |
doi: 10.1128/MRA.00418-21 |
| 14 |
小野寺 康之 |
Yasuyuki Onodera |
A spinach genome assembly with remarkable completeness, and its use for rapid identification of candidate genes for agronomic traits |
DNA research : an international journal for rapid publication of reports on genes and genomes. 2021 Jun 25;28(3):dsab004. |
34142133 |
doi: 10.1093/dnares/dsab004 |
| 15 |
宮原 平 |
Taira Miyahara |
Effect of Transgenic Rootstock Grafting on the Omics Profiles in Tomato |
Food safety (Tokyo, Japan). 2021 Jun 25;9(2):32-47. |
34249588 |
doi: 10.14252/foodsafetyfscj.D-20-00032 |
| 16 |
齋藤 裕 |
Yutaka Saito |
Machine learning approach for discrimination of genotypes based on bright-field cellular images |
NPJ systems biology and applications. 2021 Jul 21;7(1):31. |
34290253 |
doi: 10.1038/s41540-021-00190-w |
| 17 |
瀬川 高弘 |
Takahiro Segawa |
Spatial and Temporal Variations in Pigment and Species Compositions of Snow Algae on Mt. Tateyama in Toyama Prefecture, Japan |
Frontiers in plant science. 2021 Jul 5;12:689119. |
34290725 |
doi: 10.3389/fpls.2021.689119 |
| 18 |
平瀬 祥太朗 |
Shotaro Hirase |
Genomic Evidence for Speciation with Gene Flow in Broadcast Spawning Marine Invertebrates |
Molecular biology and evolution. 2021 Oct 27;38(11):4683-4699. |
34311468 |
doi: 10.1093/molbev/msab194 |
| 19 |
松波 雅俊 |
Masatoshi Matsunami |
Coevolution between MHC class I and Antigen Processing Genes in salamanders. |
Molecular biology and evolution. 2021 Oct 27;38(11):5092-5106. |
34375431 |
doi: 10.1093/molbev/msab237 |
| 20 |
高橋 鉄美 |
Tetsumi Takahashi |
Mapping of quantitative trait loci underlying a magic trait in ongoing ecological speciation |
BMC genomics. 2021 Aug 12;22(1):615. |
34384356 |
doi: 10.1186/s12864-021-07908-4 |
| 21 |
瀬川 高弘, 西原 秀典 |
Takahiro Segawa, Hidenori Nishihara |
Ancient DNA reveals multiple origins and migration waves of extinct Japanese brown bear lineages |
Royal Society open science. 2021 Aug 4;8(8):210518. |
34386259 |
doi: 10.1098/rsos.210518 |
| 22 |
川崎 純菜, 堀江 真行 |
Junna Kawasaki, Masayuki Horie |
Hidden Viral Sequences in Public Sequencing Data and Warning for Future Emerging Diseases |
mBio. 2021 Aug 31;12(4):e0163821. |
34399612 |
doi: 10.1128/mBio.01638-21 |
| 23 |
草間 和哉 |
Kazuya Kusama |
The effect of bta-miR-26b in intrauterine extracellular vesicles on maternal immune system during the implantation period |
Biochemical and biophysical research communications. 2021 Oct 8;573:100-106. |
34403805 |
doi: 10.1016/j.bbrc.2021.08.019 |
| 24 |
松前 ひろみ |
Hiromi Matsumae |
Exploring correlations in genetic and cultural variation across language families in Northeast Asia |
Science advances. 2021 Aug 18;7(34):eabd9223. |
34407936 |
doi: 10.1126/sciadv.abd9223 |
| 25 |
石川 麻乃 |
Asano Ishikawa |
The effect of bta-miR-26b in intrauterine extracellular vesicles on maternal immune system during the implantation period |
Biology letters. 2021 Aug;17(8):20210204. |
34428959 |
doi: 10.1098/rsbl.2021.0204 |
| 26 |
湯山 育子 |
Ikuko Yuyama |
Transcriptome Analysis of Durusdinium Associated with the Transition from Free-Living to Symbiotic |
Microorganisms. 2021 Jul 22;9(8):1560. |
34442639 |
doi: 10.3390/microorganisms9081560 |
| 27 |
前野 慎太朗, 谷澤 靖洋, 遠藤 明仁 |
Shintaro Maeno, Yasuhiro Tanizawa, Akihito Endo |
Oligosaccharide Metabolism and Lipoteichoic Acid Production in Lactobacillus gasseri and Lactobacillus paragasseri |
Microorganisms. 2021 Jul 26;9(8):1590. |
34442669 |
doi: 10.3390/microorganisms9081590 |
| 28 |
門田 有希 |
Yuki Monden |
Transcriptome Analysis Reveals Key Genes Involved in Weevil Resistance in the Hexaploid Sweetpotato |
Plants (Basel, Switzerland). 2021 Jul 27;10(8):1535. |
34451581 |
doi: 10.3390/plants10081535 |
| 29 |
向笠 勝貴 |
Katsuki Mukaigasa |
The developmental hourglass model is applicable to the spinal cord based on single-cell transcriptomes and non-conserved cis-regulatory elements |
Development, growth & differentiation. 2021 Sep;63(7):372-391. |
34473348 |
doi: 10.1111/dgd.12750 |
| 30 |
松井 求 |
Motomu Matsui |
Machine learning-assisted single-cell Raman fingerprinting for in situ and nondestructive classification of prokaryotes |
iScience. 2021 Aug 11;24(9):102975. |
34485857 |
doi: 10.1016/j.isci.2021.102975 |
| 31 |
加藤 有己 |
Yuki Kato |
Mutations in the adenosine deaminase ADAR1 that prevent endogenous Z-RNA editing induce Aicardi-Goutieres syndrome-like encephalopathy |
Immunity. 2021 Sep 14;54(9):1976-1988.e7. |
34525338 |
doi: 10.1016/j.immuni.2021.08.022 |
| 32 |
松波 雅俊 |
Masatoshi Matsunami |
Species divergence and repeated ancient hybridization in a Sulawesian lake system |
Journal of evolutionary biology. 2021 Nov;34(11):1767-1780. |
34532915 |
doi: 10.1111/jeb.13932 |
| 33 |
井原 邦夫 |
Kunio Ihara |
Identification of ksg1 mutation showing long-lived phenotype in fission yeast |
Genes to cells : devoted to molecular & cellular mechanisms. 2021 Dec;26(12):967-978. |
34534388 |
doi: 10.1111/gtc.12897 |
| 34 |
一色 真理子 |
Mariko Isshiki |
Admixture with indigenous people helps local adaptation: admixture-enabled selection in Polynesians |
BMC ecology and evolution. 2021 Sep 22;21(1):179. |
34551727 |
doi: 10.1186/s12862-021-01900-y |
| 35 |
西原 秀典 |
Hidenori Nishihara |
Replacement of owl monkey centromere satellite by a newly evolved variant was a recent and rapid process |
Genes to cells : devoted to molecular & cellular mechanisms. 2021 Dec;26(12):979-986. |
34570411 |
doi: 10.1111/gtc.12898 |
| 36 |
草間 和哉, 吉田 佳乃子 |
Kazuya Kusama, Kanoko Yoshida |
PGE2 and Thrombin Induce Myofibroblast Transdifferentiation via Activin A and CTGF in Endometrial Stromal Cells |
Endocrinology. 2021 Dec 1;162(12):bqab207. |
34606582 |
doi: 10.1210/endocr/bqab207 |
| 37 |
小林 正樹 |
Masaki J Kobayashi |
The genome of Shorea leprosula (Dipterocarpaceae) highlights the ecological relevance of drought in aseasonal tropical rainforests |
Communications biology. 2021 Oct 7;4(1):1166. |
34620991 |
doi: 10.1038/s42003-021-02682-1 |
| 38 |
浜口 悠 |
Yu Hamaguchi |
Impact of human gene annotations on RNA-seq differential expression analysis |
BMC genomics. 2021 Oct 8;22(1):730. |
34625021 |
doi: 10.1186/s12864-021-08038-7 |
| 39 |
植松 真章 |
Masaaki Uematsu |
Raman microscopy-based quantification of the physical properties of intracellular lipids |
Communications biology. 2021 Oct 8;4(1):1176. |
34625633 |
doi: 10.1038/s42003-021-02679-w |
| 40 |
佐藤 綾 |
Aya Satoh |
De novo assembly and annotation of the mangrove cricket genome |
BMC research notes. 2021 Oct 9;14(1):387. |
34627387 |
doi: 10.1186/s13104-021-05798-z |
| 41 |
山﨑 曜 |
Yo Y Yamasaki |
Gudgeon fish with and without genetically determined countershading coexist in heterogeneous littoral environments of an ancient lake |
Ecology and evolution. 2021 Aug 31;11(19):13283-13294. |
34646469 |
doi: 10.1002/ece3.8050 |
| 42 |
杉本 竜太 |
Ryota Sugimoto |
Comprehensive discovery of CRISPR-targeted terminally redundant sequences in the human gut metagenome: Viruses, plasmids, and more |
PLoS computational biology. 2021 Oct 21;17(10):e1009428. |
34673779 |
doi: 10.1371/journal.pcbi.1009428 |
| 43 |
中村 保一 |
Yasukazu Nakamura |
Genome sequencing of the NIES Cyanobacteria collection with a focus on the heterocyst-forming clade. |
DNA research : an international journal for rapid publication of reports on genes and genomes. 2021 Oct 11;28(6):dsab024. |
34677568 |
doi: 10.1093/dnares/dsab024 |
| 44 |
安河内 彦輝 |
Yoshiki Yasukochi |
Upregulation of cathepsin L gene under mild cold conditions in young Japanese male adults |
Journal of physiological anthropology. 2021 Oct 22;40(1):16. |
34686211 |
doi: 10.1186/s40101-021-00267-9 |
| 45 |
谷澤 靖洋, 矢倉 勝, 中村 保一 |
Yasuhiro Tanizawa, Masaru Yagura, Yasukazu Nakamura |
Identification of the sex-determining factor in the liverwort Marchantia polymorpha reveals unique evolution of sex chromosomes in a haploid system. |
Current biology : CB. 2021 Dec 20;31(24):5522-5532.e7. |
34735792 |
doi: 10.1016/j.cub.2021.10.023 |
| 46 |
宮澤 清太 |
Seita Miyazawa |
Studies of Turing pattern formation in zebrafish skin |
Philosophical transactions. Series A, Mathematical, physical, and engineering sciences. 2021 Dec 27;379(2213):20200274. |
34743596 |
doi: 10.1098/rsta.2020.0274 |
| 47 |
谷澤 靖洋, 遠野 雅徳 |
Yasuhiro Tanizawa, Masanori Tohno |
Clostridium zeae sp. nov., isolated from corn silage |
International journal of systematic and evolutionary microbiology. 2021 Nov;71(11). |
34748474 |
doi: 10.1099/ijsem.0.005088 |
| 48 |
中川 草 |
So Nakagawa |
An ancient retroviral RNA element hidden in mammalian genomes and its involvement in co-opted retroviral gene regulation |
Retrovirology. 2021 Nov 10;18(1):36. |
34753509 |
doi: 10.1186/s12977-021-00580-2 |
| 49 |
Evariste Tshibangu-Kabamba |
Evariste Tshibangu-Kabamba |
High-Resolution Linear Epitope Mapping of the Receptor Binding Domain of SARS-CoV-2 Spike Protein in COVID-19 mRNA Vaccine Recipients |
Microbiology spectrum. 2021 Dec 22;9(3):e0096521. |
34756082 |
doi: 10.1128/Spectrum.00965-21 |
| 50 |
神澤 秀明 |
Hideaki Kanzawa-Kiriyama |
Triangulation supports agricultural spread of the Transeurasian languages |
Nature. 2021 Nov;599(7886):616-621. |
34759322 |
doi: 10.1038/s41586-021-04108-8 |
| 51 |
中尾 亮 |
Ryo Nakao |
Complete Genome Sequence of Leptospira kobayashii Strain E30, Isolated from Soil in Japan |
Microbiology resource announcements. 2021 Nov 11;10(45):e0090721. |
34761960 |
doi: 10.1128/MRA.00907-21 |
| 52 |
加藤 有己 |
Yuki Kato |
An Aicardi-Goutieres syndrome-causative point mutation in Adar1 gene invokes multi-organ inflammation and late-onset encephalopathy in mice |
Journal of immunology (Baltimore, Md. : 1950). 2021 Dec 15;207(12):3016-3027. |
34772697 |
doi: 10.4049/jimmunol.2100526 |
| 53 |
津田 勝利 |
Katsutoshi Tsuda |
Collection, preservation and distribution of Oryza genetic resources by the National Bioresource Project RICE (NBRP-RICE) |
Breeding science. 2021 Jun;71(3):291-298. |
34776736 |
doi: 10.1270/jsbbs.21005 |
| 54 |
下村 晃一郎 |
Koichiro Shimomura |
Identification of quantitative trait loci for powdery mildew resistance in highly resistant cucumber (Cucumis sativus L.) using ddRAD-seq analysis |
Breeding science. 2021 Jun;71(3):326-333. |
34776739 |
doi: 10.1270/jsbbs.20141 |
| 55 |
趙 世涛 |
Shitao Zhao |
Multi-resBind: a residual network-based multi-label classifier for in vivo RNA binding prediction and preference visualization |
BMC bioinformatics. 2021 Nov 15;22(1):554. |
34781902 |
doi: 10.1186/s12859-021-04430-y |
| 56 |
美世 一守 |
Kazumori Mise |
Undervalued Pseudo-nifH Sequences in Public Databases Distort Metagenomic Insights into Biological Nitrogen Fixers |
mSphere. 2021 Dec 22;6(6):e0078521. |
34787447 |
doi: 10.1128/msphere.00785-21 |
| 57 |
水口 洋平, 豊田 敦 |
Yohei Minakuchi, Atsushi Toyoda |
Genome sequencing of the multicellular alga Astrephomene provides insights into convergent evolution of germ-soma differentiation |
Scientific reports. 2021 Nov 22;11(1):22231. |
34811380 |
doi: 10.1038/s41598-021-01521-x |
| 58 |
川本 麻祐子, 河田 雅圭 |
Mayuko Kawamoto, Masakado Kawata |
Genetic basis of orange spot formation in the guppy (Poecilia reticulata) |
BMC ecology and evolution. 2021 Nov 25;21(1):211. |
34823475 |
doi: 10.1186/s12862-021-01942-2 |
| 59 |
佐藤 健吾 |
Kengo Sato |
A Max-Margin Model for Predicting Residue-Base Contacts in Protein-RNA Interactions |
Life (Basel, Switzerland). 2021 Oct 25;11(11):1135. |
34833011 |
doi: 10.3390/life11111135 |
| 60 |
Vo Phuoc Tuan, 矢原 耕史 |
Vo Phuoc Tuan, Koji Yahara |
Genome-wide association study of gastric cancer- and duodenal ulcer-derived Helicobacter pylori strains reveals discriminatory genetic variations and novel oncoprotein candidates |
Microbial genomics. 2021 Nov;7(11):000680. |
34846284 |
doi: 10.1099/mgen.0.000680 |
| 61 |
有泉 亨 |
Tohru Ariizumi |
Organelle genome assembly uncovers the dynamic genome reorganization and cytoplasmic male sterility associated genes in tomato |
Horticulture research. 2021 Dec 1;8(1):250. |
34848681 |
doi: 10.1038/s41438-021-00676-y |
| 62 |
渡邊 美穂 |
Miho Watanabe |
Mariniplasma anaerobium gen. nov., sp. nov., a novel anaerobic marine mollicute, and proposal of three novel genera to reclassify members of Acholeplasma clusters II-IV |
International journal of systematic and evolutionary microbiology. 2021 Dec;71(12). |
34874244 |
doi: 10.1099/ijsem.0.005138 |
| 63 |
新里 宙也 |
Chuya Shinzato |
Whole-Genome Sequencing Highlights Conservative Genomic Strategies of a Stress-Tolerant, Long-Lived Scleractinian Coral, Porites australiensis Vaughan, 1918 |
Genome biology and evolution. 2021 Dec 1;13(12):evab270. |
34878117 |
doi: 10.1093/gbe/evab270 |
| 64 |
遠野 雅徳, 谷澤 靖洋 |
Masanori Tohno, Yasuhiro Tanizawa |
Lentilactobacillus fungorum sp. nov., isolated from spent mushroom substrates |
International journal of systematic and evolutionary microbiology. 2021 Dec;71(12). |
34913426 |
doi: 10.1099/ijsem.0.005184 |
| 65 |
大島 一里 |
Kazusato Ohshima |
Genomic Epidemiology and Evolution of Scallion Mosaic Potyvirus From Asymptomatic Wild Japanese Garlic |
Frontiers in microbiology. 2021 Dec 8;12:789596. |
34956155 |
doi: 10.3389/fmicb.2021.789596 |
| 66 |
武藤 吉徳 |
Yoshinori Muto |
Neuropsychiatric Adverse Events of Montelukast: An Analysis of Real-World Datasets and drug−gene Interaction Network |
Frontiers in pharmacology. 2021 Dec 20;12:764279. |
34987393 |
doi: 10.3389/fphar.2021.764279 |
| 67 |
松尾 俊彦 |
Toshihiko Matsuo |
Whole Exome-Sequencing of Pooled Genomic DNA Samples to Detect Quantitative Trait Loci in Esotropia and Exotropia of Strabismus in Japanese |
Life (Basel, Switzerland). 2021 Dec 27;12(1):41. |
35054434 |
doi: 10.3390/life12010041 |
| 68 |
花野 滋 |
Shigeru Hanano |
Development of the Binary Vector pTACAtg1 for Stable Gene Expression in Plant; Reduction of Gene Silencing in Transgenic Plants Carrying the Target Gene with Long Flanking Sequences |
Plant biotechnology (Tokyo, Japan). 2021 Dec 25;38(4):391-400. |
35087303 |
doi: 10.5511/plantbiotechnology.21.0823a |
| 69 |
田崎 啓介 |
Keisuke Tasaki |
Identification and characterization of xanthone biosynthetic genes contributing to the vivid red coloration of red-flowered gentian |
The Plant journal : for cell and molecular biology. 2021 Sep;107(6):1711-1723. |
34245606 |
doi: 10.1111/tpj.15412 |
| 70 |
長﨑 正朗 |
Masao Nagasaki |
Practical guide for managing large-scale human genome data in research |
Journal of human genetics. 2021 Jan;66(1):39-52. |
33097812 |
doi: 10.1038/s10038-020-00862-1 |
| 71 |
丹野 広貴 |
Hiroki Tanno |
Characterization of fructooligosaccharide metabolism and fructooligosaccharide-degrading enzymes in human commensal butyrate producers |
Gut microbes. 2021 Jan-Dec;13(1):1-20. |
33439065 |
doi: 10.1080/19490976.2020.1869503 |
| 72 |
河合 洋介 |
Yosuke Kawai |
Genome-wide SNP data of Izumo and Makurazaki populations support inner-dual structure model for origin of Yamato people |
Journal of human genetics. 2021 Jul;66(7):681-687. |
33495571 |
doi: 10.1038/s10038-020-00898-3 |
| 73 |
堀江 真行 |
Masayuki Horie |
Identification of novel avian and mammalian deltaviruses provides new insights into deltavirus evolution |
Virus evolution. 2021 Feb 12;7(1):veab003. |
33614159 |
doi: 10.1093/ve/veab003 |
| 74 |
和智 仲是 |
Nakatada Wachi |
Genomic population structure of sympatric sexual and asexual populations in a parasitic wasp, Meteorus pulchricornis (Hymenoptera: Braconidae), inferred from six hundred single-nucleotide polymorphism loci |
Molecular ecology. 2021 Apr;30(7):1612-1623. |
33634920 |
doi: 10.1111/mec.15834 |
| 75 |
西田 奈央 |
Nao Nishida |
Importance of HBsAg recognition by HLA molecules as revealed by responsiveness to different hepatitis B vaccines |
Scientific reports. 2021 Mar 2;11(1):3703. |
33654122 |
doi: 10.1038/s41598-021-82986-8 |
| 76 |
谷澤 靖洋, 津田 勝利, 中村 保一 |
Yasuhiro Tanizawa, Katsutoshi Tsuda, Yasukazu Nakamura |
OryzaGenome2.1: Database of Diverse Genotypes in Wild Oryza Species |
Rice (New York, N.Y.). 2021 Mar 4;14(1):24. |
33661371 |
doi: 10.1186/s12284-021-00468-x |
| 77 |
竹崎 直子 |
Naoko Takezaki |
Resolving the Early Divergence Pattern of Teleost Fish Using Genome-Scale Data |
Genome biology and evolution. 2021 May 7;13(5):evab052. |
33739405 |
doi: 10.1093/gbe/evab052 |
| 78 |
川久保 修佑 |
Shusuke Kawakubo |
Genomic analysis of the brassica pathogen turnip mosaic potyvirus reveals its spread along the former trade routes of the Silk Road |
Proceedings of the National Academy of Sciences of the United States of America. 2021 Mar 23;118(12):e2021221118. |
33741737 |
doi: 10.1073/pnas.2021221118 |
| 79 |
殿崎 薫 |
Kaoru Tonosaki |
Mutation of the imprinted gene OsEMF2a induces autonomous endosperm development and delayed cellularization in rice |
The Plant cell. 2021 Mar 22;33(1):85-103. |
33751094 |
doi: 10.1093/plcell/koaa006 |
| 80 |
松尾 芳隆 |
Yoshitaka Matsuo |
The ribosome collision sensor Hel2 functions as preventive quality control in the secretory pathway |
Cell reports. 2021 Mar 23;34(12):108877. |
33761353 |
doi: 10.1016/j.celrep.2021.108877 |
| 81 |
矢原 耕史 |
Koji Yahara |
Emergence and evolution of antimicrobial resistance genes and mutations in Neisseria gonorrhoeae |
Genome medicine. 2021 Mar 30;13(1):51. |
33785063 |
doi: 10.1186/s13073-021-00860-8 |
| 82 |
吉武 和敏 |
Kazutoshi Yoshitake |
Estimation of tuna population by the improved analytical pipeline of unique molecular identifier-assisted HaCeD-Seq (haplotype count from eDNA) |
Scientific reports. 2021 Apr 12;11(1):7031. |
33846364 |
doi: 10.1038/s41598-021-86190-6 |
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A ubiquitin-like protein encoded by the "noncoding" RNA TINCR promotes keratinocyte proliferation and wound healing |
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Molecular phylogenetics and evolution. 2021 Feb;155:107005. |
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Unique niche-specific adaptation of fructophilic lactic acid bacteria and proposal of three Apilactobacillus species as novel members of the group |
BMC microbiology. 2021 Feb 9;21(1):41. |
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Chromosome-level genome assembly of Ophiorrhiza pumila reveals the evolution of camptothecin biosynthesis |
Nature communications. 2021 Jan 15;12(1):405. |
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BMC medical genomics. 2021 Jan 7;14(1):17. |
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De novo genome assembly of two tomato ancestors, Solanum pimpinellifolium and Solanum lycopersicum var. cerasiforme, by long-read sequencing |
DNA research : an international journal for rapid publication of reports on genes and genomes. 2021 Jan 19;28(1):dsaa029. |
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Yohei Minakuchi, Atsushi Toyoda |
Comparative analysis using the draft genome sequence of California poppy (Eschscholzia californica) for exploring the candidate genes involved in benzylisoquinoline alkaloid biosynthesis |
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Complete sequences of Schizosaccharomyces pombe subtelomeres reveal multiple patterns of genome variation |
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Rena Onoguchi-Mizutani, Nobuyoshi Akimitsu |
Identification of novel heat shock-induced long noncoding RNA in human cells |
Journal of biochemistry. 2021 Apr 29;169(4):497-505. |
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Prefecture-level population structure of the Japanese based on SNP genotypes of 11,069 individuals |
Journal of human genetics. 2021 Apr;66(4):431-437. |
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PBSIM2: a simulator for long-read sequencers with a novel generative model of quality scores |
Bioinformatics (Oxford, England). 2021 May 5;37(5):589-595. |
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Draft genome sequence of Cytophagales sp. strain WSM2-2, isolated from garden soil |
Microbiology resource announcements. 2021 Jan 14;10(2):e01238-20. |
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Identification of ancient viruses from metagenomic data of the Jomon people |
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The transcriptional response to salicylic acid plays a role in Fusarium yellows resistance in Brassica rapa L |
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Shunsuke Kanamori, Masakado Kawata |
Detection of genes positively selected in Cuban Anolis lizards that naturally inhabit hot and open areas, and currently thrive in urban areas |
Ecology and evolution. 2021 Jan 29;11(4):1719-1728. |
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A dual enhancer-silencer element, DES-K16, in mouse spermatocyte-derived GC-2spd(ts) cells |
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Novel and transgressive salinity tolerance in recombinant inbred lines of rice created by physiological coupling-uncoupling and network rewiring effects |
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Complete sequence and structure of the genome of the harmful algal bloom-forming cyanobacterium Planktothrix agardhii NIES-204T and detailed analysis of secondary metabolite gene clusters |
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A Novel DNA Chromatography Method to Discriminate Mycobacterium abscessus Subspecies and Macrolide Susceptibility |
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Oral RNAi of diap1 results in rapid reduction of damage to potatoes in Henosepilachna vigintioctopunctata |
Journal of Pest Science volume 94, pages505–515 (2021) |
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Masatoshi Matsunami |
Transcriptomic Changes in Hot Spring Frog Tadpoles (Buergeria otai) in Response to Heat Stress |
Frontiers in Ecology and Evolution, October 2021, Volume 9, Article 706887, Pages1-9 |
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Kazunori D YAMADA, Fangzhou LIN |
Developing a novel recurrent neural network architecture with fewer parameters and good learning performance |
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Nina Yasuda |
Phylogeography of Blue Corals (Genus Heliopora) Across the Indo-West Pacific |
Frontiers in Marine Science, August 2021, Volume 8, Article 714662 |
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Inheritance of spheroid body and plastid in the raphid diatom Epithemia (Bacillariophyta) during sexual reproduction |
Phycologia, Volume 60, 2021-Issue 3,Pages 265-273 |
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An Effective Convolutional Neural Network for Visualized Understanding Transboundary Air Pollution Based on Himawari-8 Satellite Images |
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Masashi Shiraishi |
Influence of Labor Conditions and Interaction Among Individuals on Circadian Activity Rhythms in the Ant Camponotus Japonicus |
Journal of Robotics and Mechatronics Vol.33 No.3, 2021, p.582-589 |
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Tsukasa Fukunaga |
Mirage: estimation of ancestral gene-copy numbers by considering different evolutionary patterns among gene families |
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Koichiro Shimomura |
Quantitative trait locus analysis of cucumber fruit texture using double‐digest restriction‐site‐associated DNA sequencing |
Euphytica volume 217, Article number: 107 (2021) |
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Masahiro Suzuki |
A new flattened species of Gracilariopsis (Gracilariales, Rhodophyta) from Japan |
Phycologia, Volume 60, 2021-Issue 2, 158-163 |
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Masahiro Suzuki |
Morpho-anatomical and molecular reassessments of Rhodymenia prostrata (Rhodymeniaceae, Rhodophyta) from Japan support the recognition of Halopeltis tanakae nom. nov |
Phycologia, Volume 60, 2021 - Issue 6, Pages 582-588 |
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Masahiro Suzuki |
Fredericqia (Phyllophoraceae, Rhodophyta) in the northwestern Pacific, with the description of Fredericqia chiharae sp. nov. |
Phycologia, Volume 60, 2021 - Issue 3, Pages 210-214 |
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Masahiro Suzuki |
A new species of the genus Sheathia (Batrachospermaceae, Rhodophyta) from Japan |
Phycologia, Volume 60, 2021 - Issue 4, Pages 368-374 |
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Masahiro Suzuki |
First record of Sheathia abscondita Stancheva, Sheath & M.L.Vis (Batrachospermaceae, Rhodophyta) from Japan. |
Bull. Natl. Mus. Nat. Sci., Ser. B, 47(4), pp. 175–182, November 22, 2021 |
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Ikuko Yuyama |
Application of RNA Interference Technology to Acroporid Juvenile Corals |
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Machine-learning-guided library design cycle for directed evolution of enzymes: the effects of training data composition on sequence space exploration |
ACS Catal. 2021, 11, 23, 14615–14624 |
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Classification of Imbalanced Data Represented as Binary Features |
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Yoshiko Shimono |
Revegetation in Japan overlooks geographical genetic structure of native Artemisia indica var. maximowiczii populations |
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Hideaki Kanzawa-Kiriyama |
Ancient genomes from the initial Jomon period: new insights into the genetic history of the Japanese archipelago |
Anthropological Science, Vol. 129(1), 13–22, 2021 |
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Kenji Satou |
The Enrichment of Texture Information to Improve Optical Flow for Silhouette Image |
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Michie Kobayashi |
Insertion of a transposable element in Less Shattering1 (SvLes1) gene is not always involved in foxtail millet (Setaria italica) domestication |
Genetic Resources and Crop Evolution volume 68, pages 2923–2930 (2021) |
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坂山 英俊 |
HidetoshiSakayama |
New distributional records, taxonomy, morphology, and genetic variations of the endangered brackish-water species Lamprothamnium succinctum (Charales, Charophyceae) in Japan |
Journal of Asia-Pacific Biodiversity, Volume 14, Issue 1, 1 March 2021, Pages 15-22 |
NULL |
doi: 10.1016/j.japb.2020.09.005 |
| 167 |
毛利 公一, 福永 津嵩 |
Koichi Mori, Tsukasa Fukunaga |
MotiMul: A significant discriminative sequence motif discovery algorithm with multiple testing correction |
IEEE, 13 January 2021 |
NULL |
doi: 10.1109/BIBM49941.2020.9313598 |
NIG Supercomputer