| Supercomputer users in authors list (Japanese) | Supercomputer users in authors list | Title | Journal, Volume, Number, Pages | PMID | DOI |
1 | 松波 雅俊 | Masatoshi Matsunami | Vertebrate paralogous conserved noncoding sequences may be related to gene expressions in brain. | Genome Biol Evol. 2013;5(1):140-50. | 23267051 | doi: 10.1093/gbe/evs128 |
2 | 二階堂 愛 | Itoshi Nikaido | Context-dependent wiring of Sox2 regulatory networks for self-renewal of embryonic and trophoblast stem cells. | Mol Cell. 2013 Nov 7;52(3):380-92. | 24120664 | doi: 10.1016/j.molcel.2013.09.002 |
3 | 二階堂 愛 | Itoshi Nikaido | Quartz-Seq: a highly reproducible and sensitive single-cell RNA sequencing method, reveals non-genetic gene-expression heterogeneity. | Genome Biol. 2013 Apr 17;14(4):R31. | 23594475 | doi: 10.1186/gb-2013-14-4-r31 |
4 | 細道 一善, 井ノ上 逸朗 | Kazuyoshi Hosomichi, Ituro Inoue | Phase-defined complete sequencing of the HLA genes by next-generation sequencing. | BMC Genomics. 2013 May 28;14:355. | 23714642 | doi: 10.1186/1471-2164-14-355 |
5 | 飯山 和弘 | Kazuhiro Iiyama | Draft Genome Sequence of Paenibacillus popilliae ATCC 14706T | Journal of Insect Biotechnology and Sericology, 2013 Volume 82 Issue 2 Pages 2_045-2_048 | NULL | doi: 10.11416/jibs.82.2_045 |
6 | 佐々木 直文 | Naobumi Sasaki | The first symbiont-free genome sequence of marine red alga, Susabi-nori (Pyropia yezoensis). | PLoS One. 2013;8(3):e57122. | 23536760 | doi: 10.1371/journal.pone.0057122 |
7 | 中川 草 | So Nakagawa | Dynamic evolution of endogenous retrovirus-derived genes expressed in bovine conceptuses during the period of placentation. | Genome Biol Evol. 2013;5(2):296-306. | 23335121 | doi: 10.1093/gbe/evt007 |
8 | 中川 草 | So Nakagawa | Phylogenetic and structural diversity in the feline leukemia virus env gene. | PLoS One. 2013 Apr 11;8(4):e61009. | 23593376 | doi: 10.1371/journal.pone.0061009 |
9 | 中川 草 | So Nakagawa | DNA-binding specificity changes in the evolution of forkhead transcription factors. | Proc Natl Acad Sci U S A. 2013 Jul 23;110(30):12349-54. | 23836653 | doi: 10.1073/pnas.1310430110 |
10 | 中 川 草 | So Nakagawa | Identification of a novel subgroup of Koala retrovirus from Koalas in Japanese zoos. | J Virol. 2013 Sep;87(17):9943-8. | 23834806 | doi: 10.1128/JVI.01385-13 |
11 | 中川 草 | So Nakagawa | Fematrin-1 is involved in fetomaternal cell-to-cell fusion in Bovinae placenta and has contributed to diversity of ruminant placentation. | J Virol. 2013 Oct;87(19):10563-72. | 23864631 | doi: 10.1128/JVI.01398-13 |
12 | 中川 草 | So Nakagawa | Transcriptional regulation of two conceptus interferon tau genes expressed in Japanese black cattle during peri-implantation period. | PLoS One. 2013 Nov 27;8(11):e80427. | 24348910 | doi: 10.1371/journal.pone.0080427 |
13 | 野口 英樹 | Hideki Noguchi | Coelacanth genomes reveal signatures for evolutionary transition from water to land. | Genome Res. 2013 Oct;23(10):1740-8. | 23878157 | doi: 10.1101/gr.158105.113 |
14 | 寺田 愛花, 瀬々 潤 | Aika Terada, Jun Sese | Statistical significance of combinatorial regulations. | Proc Natl Acad Sci U S A. 2013 Aug 6;110(32):12996-3001. | 23882073 | doi: 10.1073/pnas.1302233110 |
15 | 高田 豊行 | Toyoyuki Takada | The ancestor of extant Japanese fancy mice contributed to the mosaic genomes of classical inbred strains. | Genome Res. 2013 Aug;23(8):1329-38. | 23604024 | doi: 10.1101/gr.156497.113 |
16 | 長崎 英樹, 望月 孝子, 神沼 英里, 中村 保一 | Hideki Nagasaki, Takako Mochizuki,Eli Kaminuma,Yasukazu Nakamura | DDBJ read annotation pipeline: a cloud computing-based pipeline for high-throughput analysis of next-generation sequencing data. | DNA Res. 2013 Aug;20(4):383-90. | 23657089 | doi: 10.1093/dnares/dst017 |
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