NIG Supercomputer

論文のリスト(2018)

2018.01.01. -- 2018.12.31にユーザによって発表された論文のリスト

2018年度の年度末アカウント継続申請時に集計した論文

Supercomputer users in authors list (Japanese) Supercomputer users in authors list Title Journal, Volume, Number, Pages PMID DOI
1 大里 直樹 Naoki Osato Characteristics of functional enrichment and gene expression level of human putative transcriptional target genes BMC Genomics. 2018 Jan 19;19(Suppl 1):957. 29363429 doi:10.1186/s12864-017-4339-5.
2 大田達郎,川島 武士, 佐藤 行人, 岩崎 渉 Tazro Ohta,Takeshi Kawashima,Yukuto Sato,Wataru Iwasaki Collaborative environmental DNA sampling from petal surfaces of flowering cherry Cerasus × yedoensis 'Somei-yoshino' across the Japanese archipelago J Plant Res. 2018 Jul;131(4):709-717. 29460198 doi:10.1007/s10265-018-1017-x.
3 佐藤 行人 Yukuto Sato Comparing local- and regional-scale estimations of thediversity of stream fish using eDNA metabarcoding andconventional observation methods Freshwater Biology:27 February 2018;Volume63, Issue6 Pages 569-580 NULL doi.org/10.1111/fwb.13094
4 中山 省悟 Shogo Nakayama Degradation of the endoplasmic reticulum-anchored transcription factor MyRF by the ubiquitin ligase SCFFbxw7 in a manner dependent on the kinase GSK-3 J Biol Chem. 2018 Apr 13;293(15):5705-5714. 29472293 doi: 10.1074/jbc.RA117.000741.
5 瀬川 高弘 Takahiro Segawa Demographic analysis of cyanobacteria based on the mutation rates estimated from an ancient ice core Heredity (Edinb). 2018 Jun;120(6):562-573. 29302050 doi: 10.1038/s41437-017-0040-3.
6 山田 和範 Kazunori D Yamada Derivative-free neural network for optimizing the scoring functions associated with dynamic programming of pairwise-profile alignment Algorithms Mol Biol. 2018 Feb 15;13:5. 29467815 doi: 10.1186/s13015-018-0123-6
7 上田 真保子 Mahoko Takahashi Ueda Different effects of two mutations on the infectivity of Ebola virus glycoprotein in nine mammalian species J Gen Virol. 2018 Feb;99(2):181-186. 29300152 doi: 10.1099/jgv.0.000999.
8 笠原 浩太 Kota Kasahara Enhanced Sampling of Molecular Dynamics Simulations of a Polyalanine Octapeptide: Effects of the Periodic Boundary Conditions on Peptide Conformation J Phys Chem B. 2018 Mar 8;122(9):2495-2503. 29439570 doi: 10.1021/acs.jpcb.7b10830.
9 二階堂 雅人 Masato Nikaido Evolution of vomeronasal receptor 1 ( V1R ) genes in the common marmoset (Callithrix jacchus) Gene. 2018 Feb 5;642:343-353. 29155331 doi: 10.1016/j.gene.2017.11.048.
10 孫 建強 Jianqiang Sun High-Throughput Sequencing of the Expressed Torafugu (Takifugu rubripes) Antibody Sequences Distinguishes IgM and IgT Repertoires and Reveals Evidence of Convergent Evolution Front Immunol. 2018 Feb 21;9:251. 29515575 doi: 10.3389/fimmu.2018.00251.
11 前原 一満 Kazumitsu Maehara Histone H3.3 sub-variant H3mm7 is required for normal skeletal muscle regeneration Nature Communications volume 9, Article number: 1400 (2018) 29643389 doi.org/10.1038/s41467-018-03845-1
12 吉田 聡子 Satoko Yoshida Host lignin composition affects haustorium induction in the parasitic plants Phtheirospermum japonicum and Striga hermonthica New Phytol. 2018 Apr;218(2):710-723. 29498051 doi: 10.1111/nph.15033.
13 吉田 聡子 Satoko Yoshida Regulation and functional diversification of root hairs Semin Cell Dev Biol. 2018 Nov;83:115-122. 28993253 doi: 10.1016/j.semcdb.2017.10.003.
14 吉田 聡子 Satoko Yoshida Transcriptomic and metabolomic reprogramming from roots to haustoria in the parasitic plant, Thesium chinense Plant Cell Physiol. 2018 Apr 1;59(4):724-733. 29281058 doi: 10.1093/pcp/pcx200.
15 岩切 淳一 Junichi Iwakiri Identification of Transposable Elements Contributing to Tissue-Specific Expression of Long Non-Coding RNAs Genes (Basel). 2018 Jan 9;9(1):23. 29315213 doi: 10.3390/genes9010023.
16 遠藤 明仁 Akihito Endo In vitro and in silico characterisation of Lactobacillus paraplantarum D2-1, a starter culture for soymilk fermentation Int J Food Sci Nutr. 2018 Nov;69(7):857-869. 29318897 doi: 10.1080/09637486.2017.1422701.
17 白 汝嵐 Rulan Bai Induction of immune-related gene expression by seminal exosomes in the porcine endometrium Biochem Biophys Res Commun. 2018 Jan 1;495(1):1094-1101. 29155178 doi: 10.1016/j.bbrc.2017.11.100.
18 水口 洋平 Yohei Minakuchi Mining of the Uncharacterized Cytochrome P450 Genes Involved in Alkaloid Biosynthesis in California Poppy Using a Draft Genome Sequence Plant Cell Physiol. 2018 Feb 1;59(2):222-233. 29301019 doi: 10.1093/pcp/pcx210.
19 山川 博幹 Hiromoto Yamakawa MutMapPlus identified novel mutant alleles of a rice starch branching enzyme IIb gene for fine-tuning of cooked rice texture Plant Biotechnol J. 2018 Jan;16(1):111-123. 28499068 doi: 10.1111/pbi.12753.
20 飯田 哲史 Tetsushi Iida Mutation in fission yeast phosphatidylinositol 4-kinase Pik1 is synthetically lethal with defect in telomere protection protein Pot1 Biochem Biophys Res Commun. 2018 Feb 19;496(4):1284-1290. 29410177 doi: 10.1016/j.bbrc.2018.02.001.
21 瀬川 高弘 Takahiro Segawa Nitrogen Cycle Evaluation (NiCE) Chip for the Simultaneous Analysis of Multiple N-Cycle Associated Genes Appl Environ Microbiol. 2018 Apr 2;84(8):e02615-17. 29427421 doi: 10.1128/AEM.02615-17.
22 高松 壮 Takeshi Takamatsu Optimized Method of Extracting Rice Chloroplast DNA for High-Quality Plastome Resequencing and de Novo Assembly Front Plant Sci. 2018 Feb 28;9:266. 29541088 doi: 10.3389/fpls.2018.00266.
23 中村 司 Tsukasa Nakamura Parallelization of MAFFT for large-scale multiple sequence alignments Bioinformatics. 2018 Jul 15;34(14):2490-2492. 29506019 doi: 10.1093/bioinformatics/bty121.
24 笠原 浩太 Kota Kasahara Phosphorylation of an intrinsically disordered region of Ets1 shifts a multi-modal interaction ensemble to an auto-inhibitory state Nucleic Acids Res. 2018 Mar 16;46(5):2243-2251. 29309620 doi: 10.1093/nar/gkx1297.
25 黒田 大祐 Daisuke Kuroda Repertoire analysis of antibody CDR-H3 loops suggests affinity maturation does not typically result in rigidification Front Immunol. 2018 Mar 2;9:413. 29545810 doi: 10.3389/fimmu.2018.00413.
26 熊谷 洋平, 岩崎 渉 Yohei Kumagai,Wataru Iwasaki Solar-panel and parasol strategies shape the proteorhodopsin distribution pattern in marine Flavobacteriia ISME J. 2018 May;12(5):1329-1343. 29410487 doi: 10.1038/s41396-018-0058-4.
27 中村 司 Tsukasa Nakamura Template-based quaternary structure prediction of proteins using enhanced profile-profile alignments Proteins. 2018 Mar;86 Suppl 1(Suppl Suppl 1):274-282. 29178285 doi: 10.1002/prot.25432.
28 加藤 毅 Tsuyoshi Kato Virus Particle Detection by Convolutional Neural Network in Transmission Electron Microscopy Images Food Environ Virol. 2018 Jun;10(2):201-208. 29352405 doi: 10.1007/s12560-018-9335-7.
29 原 雄一郎 Yuichiro Hara Madagascar ground gecko genome analysis characterizes asymmetric fates of duplicated genes BMC Biol. 2018 Apr 16;16(1):40. 29661185 doi: 10.1186/s12915-018-0509-4.
30 小柳 亮 Ryo Koyanagi Review of Schismatogobius (Gobiidae) from Japan, with the description of a new species Ichthyological Research volume 65, pages56-77 (2018) NULL doi.org/10.1007/s10228-017-0593-4
31 松前 ひろみ Hiromi Matsumae The prehistoric peopling of Southeast Asia. Science. 2018 Jul 6;361(6397):88-92. 29976827 doi: 10.1126/science.aat3628.
32 浜田 道昭 Michiaki Hamada Beyond similarity assessment: selecting the optimal model for sequence alignment via the Factorized Asymptotic Bayesian algorithm. Bioinformatics. 2018 Feb 15;34(4):576-584. 29040374 doi: 10.1093/bioinformatics/btx643.
33 北住愛, 中村 保一 Ai Kitazumi,Yasukazu Nakamura Potential of Oryza officinalis to augment the cold tolerance genetic mechanisms of Oryza sativa by network complementation Scientific Reports volume 8, Article number: 16346 (2018) NULL doi.org/10.1038/s41598-018-34608-z
34 吉田 光範 Mitsunori Yoshida Complete Genome Sequence of a Type Strain of Mycobacterium abscessus subsp. bolletii, a Member of the Mycobacterium abscessus Complex. Genome Announc. 2018 Feb 1;6(5):e01530-17. 29437099 doi: 10.1128/genomeA.01530-17.
35 岩切 淳一 Junichi Iwakiri Capturing alternative secondary structures of RNA by decomposition of base-pairing probabilities BMC Bioinformatics. 2018 Feb 19;19(Suppl 1):38. 29504917 doi: 10.1186/s12859-018-2018-4.
36 坊農 秀雅 Hidemasa Bono Construction of a simple evaluation system for the intestinal absorption of an orally administered medicine using Bombyx mori larvae. Drug Discov Ther. 2018;12(1):7-15. 29553084 doi: 10.5582/ddt.2018.01004.
37 黒田 真也 Shinya Kuroda Increase in hepatic and decrease in peripheral insulin clearance characterize abnormal temporal patterns of serum insulin in diabetic subjects NPJ Syst Biol Appl. 2018 Mar 14;4:14. 29560274 doi: 10.1038/s41540-018-0051-6.
38 岩崎 渉 Wataru Iwasaki MitoFish and MiFish pipeline: a mitochondrial genome database of fish with an analysis pipeline for environmental DNA metabarcoding. Mol Biol Evol. 2018 Jun 1;35(6):1553-1555. 29668970 doi: 10.1093/molbev/msy074.
39 加藤 有己 Yuki Kato Myotube-derived factor promotes oligodendrocyte precursor cell proliferation Biochem Biophys Res Commun. 2018 Jun 7;500(3):609-613. 29679562 doi: 10.1016/j.bbrc.2018.04.118.
40 大貫 慎輔 Shinsuke Ohnuki High-dimensional single-cell phenotyping reveals extensive haploinsufficiency. PLoS Biol. 2018 May 16;16(5):e2005130. 29768403 doi: 10.1371/journal.pbio.2005130.
41 吉田 光範 Mitsunori Yoshida Complete Genome Sequence of Mycobacterium marinum ATCC927T, Obtained Using Nanopore and Illumina Sequencing Technologies Genome Announc. 2018 May 17;6(20):e00397-18. 29773624 doi: 10.1128/genomeA.00397-18.
42 笠原 浩太 Kota Kasahara Unfolding of α-helical 20-residue poly-glutamic acid analyzed by multiple runs of canonical molecular dynamics simulations PeerJ. 2018 May 15;6:e4769. 29780670 doi: 10.7717/peerj.4769.
43 谷澤 靖洋,遠藤 明仁 Yasuhiro Tanizawa,Akihito Endo Comparative analysis of probiotic bacteria based on a new definition of core genome J Bioinform Comput Biol. 2018 Jun;16(3):1840012. 29792377 doi: 10.1142/S0219720018400127.
44 曽 超 Chao Zeng Identification and analysis of ribosome-associated lncRNAs using ribosome profiling data BMC Genomics. 2018 May 29;19(1):414. 29843593 doi: 10.1186/s12864-018-4765-z.
45 吉田 光範 Mitsunori Yoshida Naturally occurring a loss of a giant plasmid from Mycobacterium ulcerans subsp. shinshuense makes it non-pathogenic. Sci Rep. 2018 May 29;8(1):8218. 29844323 doi: 10.1038/s41598-018-26425-1
46 濱田 麻友子 Mayuko Hamada Metabolic co-dependence drives the evolutionarily ancient Hydra-Chlorella symbiosis Elife. 2018 May 31;7:e35122. 29848439 doi: 10.7554/eLife.35122.
47 東 光一 Koichi Higashi Latent environment allocation of microbial community data PLoS Comput Biol. 2018 Jun 6;14(6):e1006143. 29874232 doi: 10.1371/journal.pcbi.1006143.
48 杉本 のぞみ,吉田 和真 Nozomi Sugimoto,Kazumasa Yoshida Genome-wide analysis of the spatiotemporal regulation of firing and dormant replication origins in human cells. Nucleic Acids Res. 2018 Jul 27;46(13):6683-6696. 29893900 doi: 10.1093/nar/gky476.
49 郷 康広 Yasuhiro Go Human-specific features of spatial gene expression and regulation in eight brain regions. Genome Res. 2018 Aug;28(8):1097-1110. 29898898 doi: 10.1101/gr.231357.117.
50 竹崎 直子 Naoko Takezaki Global Rate Variation in Bony Vertebrates Genome Biol Evol. 2018 Jul 1;10(7):1803-1815. 29931060 doi: 10.1093/gbe/evy125.
51 福永 津嵩 Tsukasa Fukunaga A novel method for assessing the statistical significance of RNA-RNA interactions between two long RNAs J Comput Biol. 2018 Sep;25(9):976-986. 29963900 doi: 10.1089/cmb.2017.0260.
52 野澤 昌文 Masafumi Nozawa Gene-by-Gene or Localized Dosage Compensation on the Neo-X Chromosome in Drosophila miranda Genome Biol Evol. 2018 Aug 1;10(8):1875-1881. 29986000 doi: 10.1093/gbe/evy148.
53 広瀬 修 Osamu Hirose SPF-CellTracker: Tracking Multiple Cells with Strongly-Correlated Moves Using a Spatial Particle Filter IEEE/ACM Trans Comput Biol Bioinform. Nov-Dec 2018;15(6):1822-1831. 29990224 doi: 10.1109/TCBB.2017.2782255.
54 西山 智明,坂山 英俊 Tomoaki Nishiyama,Hidetoshi Sakayama The Chara genome: secondary complexity and implications for plant terrestrialization Cell. 2018 Jul 12;174(2):448-464.e24. 30007417 doi: 10.1016/j.cell.2018.06.033.
55 清水 徳朗 Tokurou Shimizu QTL mapping of male sterility and transmission pattern in progeny of Satsuma mandarin PLoS One. 2018 Jul 17;13(7):e0200844. 30016346 doi: 10.1371/journal.pone.0200844.
56 小保方 潤一 Junichi Obokata Characterization of spliced leader trans-splicing in a photosynthetic rhizarian amoeba, Paulinella micropora, and its possible role in functional gene transfer PLoS One. 2018 Jul 19;13(7):e0200961. 30024971 doi: 10.1371/journal.pone.0200961.
57 小野 肇 Hajime Ono Functional characterization of olfactory receptors in the Oriental fruit fly Bactrocera dorsalis that respond to plant volatiles Insect Biochem Mol Biol. 2018 Oct;101:32-46. 30026095 doi: 10.1016/j.ibmb.2018.07.002.
58 渡邊 日佳流 Hikaru Watanabe Minor taxa in human skin microbiome contribute to the personal identification. PLoS One. 2018 Jul 25;13(7):e0199947. 30044822 doi: 10.1371/journal.pone.0199947.
59 矢原 耕史 Koji Yahara Genomic surveillance of Neisseria gonorrhoeae to investigate the distribution and evolution of antimicrobial resistance determinants and lineages Microb Genom. 2018 Aug;4(8):e000205. 30063202 doi: 10.1099/mgen.0.000205.
60 矢原 耕史 Koji Yahara Investigation of recombination-intense viral groups and their genes in the Earth's virome Sci Rep. 2018 Jul 31;8(1):11496. 30065291 doi: 10.1038/s41598-018-29272-2.
61 田中 龍聖 Ryusei Tanaka Biology and genome of a newly discovered sibling species of Caenorhabditis elegans. Nat Commun. 2018 Aug 10;9(1):3216. 30097582 doi: 10.1038/s41467-018-05712-5.
62 水口 洋平, 豊田 敦 Yohei Minakuchi,Atsushi Toyoda Endoribonuclease ENDU-2 regulates multiple traits including cold tolerance via cell autonomous and nonautonomous controls in Caenorhabditis elegans Proc Natl Acad Sci U S A. 2018 Aug 28;115(35):8823-8828. 30104389 doi: 10.1073/pnas.1808634115.
63 山口 淳一 Junichi Yamaguchi The Genomic Basis of Color Pattern Polymorphism in the Harlequin Ladybird. Curr Biol. 2018 Oct 22;28(20):3296-3302.e7. 30146156 doi: 10.1016/j.cub.2018.08.023.
64 谷澤 靖洋, 遠藤 明仁, 遠野 雅徳 Yasuhiro Tanizawa,Akihito Endo,Masanori Tohno Lactobacillus paragasseri sp. nov., a sister taxon of Lactobacillus gasseri, based on whole-genome sequence analyses Int J Syst Evol Microbiol. 2018 Nov;68(11):3512-3517. 30226464 doi: 10.1099/ijsem.0.003020.
65 熊谷 雄太郎 Yutaro Kumagai Waves of chromatin modifications in mouse dendritic cells in response to LPS stimulation Genome Biol. 2018 Sep 19;19(1):138. 30231913 doi: 10.1186/s13059-018-1524-z.
66 安藤 俊哉, 水口 洋平, 矢野 健太郎, 豊田 敦 Toshiya Ando,Yohei Minakuchi,Kentaro Yano,Atsushi Toyoda Repeated inversions within a pannier intron drive diversification of intraspecific colour patterns of ladybird beetles Nat Commun. 2018 Sep 21;9(1):3843. 30242156 doi: 10.1038/s41467-018-06116-1.
67 笠原 浩太 Kota Kasahara Influence of various parameters in the replica-exchange molecular dynamics method: Number of replicas, replica-exchange frequency, and thermostat coupling time constant Biophys Physicobiol. 2018 Aug 8;15:165-172. 30250775 doi: 10.2142/biophysico.15.0_165.
68 黒田 真也 Shinya Kuroda Trans-omic Analysis Reveals Selective Responses to Induced and Basal Insulin across Signaling, Transcriptional, and Metabolic Networks iScience. 2018 Sep 28;7:212-229. 30267682 doi: 10.1016/j.isci.2018.07.022.
69 水口 洋平, 豊田 敦 Yohei Minakuchi,Atsushi Toyoda Anisogamy evolved with a reduced sex-determining region in volvocine green algae Commun Biol. 2018 Mar 8;1:17. 30271904 doi: 10.1038/s42003-018-0019-5.
70 佐藤 大気, 河田 雅圭 Daiki X Sato,Masakado Kawata Positive and balancing selection on SLC18A1 gene associated with psychiatric disorders and human-unique personality traits. Evol Lett. 2018 Aug 21;2(5):499-510. 30283697 doi: 10.1002/evl3.81.
71 加藤 有己 Kato Yuki ADAR1-mediated RNA editing is required for thymic self-tolerance and prevention of autoimmunity EMBO Rep. 2018 Dec;19(12):e46303. 30361393 doi: 10.15252/embr.201846303.
72 吉武 和敏 Kazutoshi Yoshitake Artificially designed hybrids facilitate efficient generation of high-resolution linkage maps. Sci Rep. 2018 Oct 31;8(1):16104. 30382134 doi: 10.1038/s41598-018-34431-6.
73 中村 保一 Yasukazu Nakamura Potential of Oryza officinalis to augment the cold tolerance genetic mechanisms of Oryza sativa by network complementation. Sci Rep. 2018 Nov 5;8(1):16346. 30397229 doi: 10.1038/s41598-018-34608-z.
74 吉田 健太郎 Kentaro Yoshida RNA-seq analysis reveals considerable genetic diversity and provides genetic markers saturating all chromosomes in the diploid wild wheat relative Aegilops umbellulata BMC Plant Biol. 2018 Nov 8;18(1):271. 30409135 doi: 10.1186/s12870-018-1498-8.
75 大里 直樹 Naoki Osato The DPP-4 inhibitor, teneligliptin enhances brown adipose tissue function, leading to the prevention of obesity in mice FEBS Open Bio. 2018 Sep 19;8(11):1782-1793. 30410858 doi: 10.1002/2211-5463.12498.
76 沖 真弥 Shinya Oki ChIP‐Atlas: a data‐mining suite powered by full integration of public ChIP‐seq data. EMBO Rep. 2018 Dec;19(12):e46255. 30413482 doi: 10.15252/embr.201846255.
77 石下 聡, 辰本 将司 Satoshi Ishishita,Shoji Tatsumoto Nonsense mutation in PMEL is associated with yellowish plumage colour phenotype in Japanese quail Sci Rep. 2018 Nov 13;8(1):16732. 30425278 doi: 10.1038/s41598-018-34827-4.
78 湯山 育子 Ikuko Yuyama Transcriptomic changes with increasing algal symbiont reveal the detailed process underlying establishment of coral-algal symbiosis Sci Rep. 2018 Nov 14;8(1):16802. 30429501 doi: 10.1038/s41598-018-34575-5.
79 鐘ケ江 弘美 Hiromi Kajiya-Kanegae Description of grain weight distribution leading to genomic selection for grain-filling PLoS One. 2018 Nov 20;13(11):e0207627. 30458025 doi: 10.1371/journal.pone.0207627.
80 吉田 健太郎 Kentaro Yoshida RNA sequencing-based bulked segregant analysis facilitates D-genome marker development for a specific chromosomal region in the synthetic hexaploid wheat Int J Mol Sci. 2018 Nov 26;19(12):3749. 30486239 doi: 10.3390/ijms19123749.
81 笠原 浩太 Kota Kasahara Characteristics of interactions at protein segments without non-local intramolecular contacts in the Protein Data Bank PLoS One. 2018 Dec 11;13(12):e0205052. 30537764 doi: 10.1371/journal.pone.0205052.
82 坂山 英俊 Hidetoshi Sakayama Transcription factor DUO1 generated by neo-functionalization is associated with evolution of sperm differentiation in plants Nat Commun. 2018 Dec 11;9(1):5283. 30538242 doi: 10.1038/s41467-018-07728-3.
83 佐藤 健吾 Kengo Sato Convolutional neural network based on SMILES representation of compounds for detecting BMC Bioinformatics. 2018 Dec 31;19(Suppl 19):526. 30598075 doi: 10.1186/s12859-018-2523-5.
84 曽 超 Chao Zeng Identifying sequence features that drive ribosomal association for lncRNA BMC Genomics. 2018 Dec 31;19(Suppl 10):906. 30598103 doi: 10.1186/s12864-018-5275-8.
85 佐藤 健吾 Kengo Sato A max-margin training of RNA secondary structure prediction integrated with the thermodynamic model J Bioinform Comput Biol. 2018 Dec;16(6):1840025. 30616476 doi: 10.1142/S0219720018400255.
86 三浦 収 Osamu Miura Recent lake expansion triggered the adaptive radiation of freshwater snails in the ancient Lake Biwa Evol Lett. 2018 Nov 30;3(1):43-54. 30788141 doi: 10.1002/evl3.92.
87 前田 太郎 Taro Maeda Genomic insight into symbiosis-induced insect color change by a facultative bacterial endosymbiont, candidatus rickettsiella viridis mBio. 2018 Jun 12;9(3):e00890-18. 29895637 doi: 10.1128/mBio.00890-18.
88 前田 太郎 Taro Maeda The genome of Rhizophagus clarus HR1 reveals a common genetic basis for auxotrophy among arbuscular mycorrhizal fungi BMC Genomics. 2018 Jun 18;19(1):465. 29914365 doi: 10.1186/s12864-018-4853-0.
89 前田 太郎 Taro Maeda Evidence of non-tandemly repeated rDNAs and their intragenomic heterogeneity in Rhizophagus irregularis Commun Biol. 2018 Jul 10;1:87. 30271968 doi: 10.1038/s42003-018-0094-7.
90 小川 智久 Tomohisa Ogawa The habu genome reveals accelerated evolution of venom protein genes. Sci Rep. 2018 Jul 26;8(1):11300. 30050104 doi: 10.1038/s41598-018-28749-4.
91 Ravinet Mark Mark Ravinet The genomic landscape at a late stage of stickleback speciation: High genomic divergence PLoS Genet. 2018 May 23;14(5):e1007358. 29791436 doi: 10.1371/journal.pgen.1007358.
92 Ravinet Mark Mark Ravinet Signatures of human-commensalism in the house sparrow genome Proc Biol Sci. 2018 Aug 8;285(1884):20181246. 30089626 doi: 10.1098/rspb.2018.1246.
93 Zhao Ran Ran Zhao Dual gene repertoires for larval and adult shells reveal molecules essential for molluscan shell formation Mol Biol Evol. 2018 Nov 1;35(11):2751-2761. 30169718 doi: 10.1093/molbev/msy172.
94 山田 和範 Kazunori D Yamada De novo profile generation based on sequence context specificity with the long short-term BMC Bioinformatics. 2018 Jul 18;19(1):272. 30021530 doi: 10.1186/s12859-018-2284-1.
95 児玉 明日香 Asuka Kodama QTLs maintaining grain fertility under salt stress detected by exome QTL-seq and interval mapping in barley Breed Sci. 2018 Dec;68(5):561-570. 30697117 doi: 10.1270/jsbbs.18082.
96 小林 和也 Kazuya Kobayashi High expression of the breast cancer susceptibility gene BRCA1 in long-lived termite kings Aging (Albany NY). 2018 Oct 11;10(10):2668-2683. 30312170 doi: 10.18632/aging.101578.
97 瀬川 高弘 Takahiro Segawa Trans+C114:D114criptomic analysis of epigenetic modification genes in the termite Reticulitermes speratus Nat Commun. 2018 Aug 6;9(1):3094. 30082897 doi: 10.1038/s41467-018-05521-w.
98 佐藤 賢二 Kenji Satou Improving Protein Sequence Classification Performance Using Adjacent and Overlapped Segments on Existing Protein Descriptors January 2018Journal of Biomedical Science and Engineering 11(06):126-143 NULL doi: 10.4236/jbise.2018.116012.
99 佐藤 賢二 Kenji Satou Improved Protein Phosphorylation Site Prediction by a New Combination of Feature Set and January 2018Journal of Biomedical Science and Engineering 11(06):144-157 NULL doi: 10.4236/jbise.2018.116013.
100 神沼 英里 Eli Kaminuma ライフサイエンス研究におけるクラウドソーシングの利用と実践 デジタルプラクティス Vol.9 No.4 (Oct. 2018) NULL NULL
101 西井 かなえ Kanae Nishii A first genetic map in the genus Streptocarpus generated with RAD sequencing based SNP markers South African Journal of Botany, 117, 158-168 - July 2018 NULL doi.org/10.1016/j.sajb.2018.05.009
102 矢野健太郎 Kentaro Yano TodoFirGene: Developing Transcriptome Resources for Genetic Analysis of Abies sachalinensis Plant Cell Physiol. 2018 Jun 1;59(6):1276-1284. 29566239 doi: 10.1093/pcp/pcy058.
103 矢野健太郎 Kentaro Yano Transcriptome of Homoeologous Genes Deduced from the Full-Length cDNA Clones of Common Wheat, Triticum aestivum L Jurnal of Genetics & Genomic Sciences.2018;vol-3, issue-1 NULL DOI: 10.24966/GGS-2485/100007
104 河田雅圭 Masakado Kawata Evolution of Gustatory Receptor Gene Family Provides Insights into Adaptation to Diverse Host Genome Biol Evol. 2018 Jun 1;10(6):1351-1362. 29788112 doi: 10.1093/gbe/evy093.
105 谷澤 靖洋 Yasuhiro Tanizawa Fructophilic Lactic Acid Bacteria, a Unique Group of Fructose-Fermenting Microbes. Appl Environ Microbiol. 2018 Sep 17;84(19):e01290-18. 30054367 doi: 10.1128/AEM.01290-18.
106 谷澤 靖洋 Yasuhiro Tanizawa DFAST: a flexible prokaryotic genome annotation pipeline for faster genome publication. Bioinformatics. 2018 Mar 15;34(6):1037-1039. 29106469 doi: 10.1093/bioinformatics/btx713.
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