| Supercomputer users in authors list (Japanese) | Supercomputer users in authors list | Title | Journal, Volume, Number, Pages | PMID | DOI |
| 1 | 谷澤 靖洋, 伊藤 佑, 中村 保一, 矢倉 勝 | Yasuhiro Tanizawa,Tasuku Ito,Yasukazu Nakamura,Masaru Yagura | Chromatin Organization in Early Land Plants Reveals an Ancestral Association between H3K27me3, Transposons, and Constitutive Heterochromatin. | Curr Biol. 2020 Feb 24;30(4):573-588.e7. | 32004456 | doi: 10.1016/j.cub.2019.12.015. |
| 2 | 谷澤 靖洋, 中村 保一, 遠野 雅徳 | Yasuhiro Tanizawa,Yasukazu Nakamura,Masanori Tohno | Reclassification of Clostridium diolis Biebl and Sproeer 2003 as a later heterotypic synonym of Clostridium beijerinckii Donker 1926 (Approved Lists 1980) emend. Keis et al. 2001 | Int J Syst Evol Microbiol. 2020 Apr;70(4):2463-2466. | 32068529 | doi: 10.1099/ijsem.0.004059. |
| 3 | 太田 明伸 | Akinobu Ota | Tandem Paired Nicking Promotes Precise Genome Editing with Scarce Interference by p53. | Cell Rep. 2020 Jan 28;30(4):1195-1207.e7. | 31995758 | doi: 10.1016/j.celrep.2019.12.064. |
| 4 | 坊農 秀雅 | Hidemasa Bono | All of gene expression (AOE): An integrated index for public gene expression databases | PLoS One. 2020 Jan 24;15(1):e0227076. | 31978081 | doi: 10.1371/journal.pone.0227076. |
| 5 | 坊農 秀雅 | Hidemasa Bono | Meta-Analysis of Hypoxic Transcriptomes from Public Databases | Biomedicines. 2020 Jan 9;8(1):10. | 31936636 | doi: 10.3390/biomedicines8010010. |
| 6 | 井原 邦夫 | Kunio Ihara | gas1 Mutation Extends Chronological Lifespan via Pmk1 and Sty1 MAPKs in Schizosaccharomyces pombe | Biosci Biotechnol Biochem. 2020 Feb;84(2):330-337. | 31601154 | doi: 10.1080/09168451.2019.1676695. |
| 7 | 福永 津嵩 | Tsukasa Fukunaga | Targeting the TR4 nuclear receptor-mediated lncTASR/AXL signaling with tretinoin increases the sunitinib sensitivity to better suppress the RCC progression | Oncogene. 2020 Jan;39(3):530-545. | 31501521 | doi: 10.1038/s41388-019-0962-8.^M |
| 8 | 小野 肇 | Hajime Ono | Functional characterization of olfactory receptors in three Dacini fruit flies (Diptera: Tephritidae) that respond to 1-nonanol analogs as components in the rectal glands | Comp Biochem Physiol B Biochem Mol Biol. 2020 Jan;239:110346. | 31499218 | doi: 10.1016/j.cbpb.2019.110346. |
| 9 | 加藤 有己 | Yuki Kato | Bivartect: accurate and memory-saving breakpoint detection by direct read comparison | Bioinformatics. 2020 May 1;36(9):2725-2730. | 31985791 | doi: 10.1093/bioinformatics/btaa059. |
| 10 | 井戸川 雅史 | Masashi Idogawa | p53-induced ARVCF modulates the splicing landscape and supports the tumor suppressive function of p53. | Oncogene. 2020 Mar;39(10):2202-2211. | 31827232 | doi: 10.1038/s41388-019-1133-7. |
| 11 | 保坂 健太郎 | Kentaro Hosaka | Complementary molecular methods reveal comprehensive phylogenetic diversity integrating inconspicuous lineages of early-diverged wood-decaying mushrooms | Sci Rep. 2020 Feb 20;10(1):3057. | 32080243 | doi: 10.1038/s41598-020-59620-0. |
| 12 | 豊田 敦, 水口 洋平 | Yohei Minakuchi,Atsushi Toyoda | The mechanoreceptor DEG-1 regulates cold tolerance in Caenorhabditis elegans. | EMBO Rep. 2020 Mar 4;21(3):e48671. | 32009302 | doi: 10.15252/embr.201948671. |
| 13 | 藤井 雅史 | Masashi Fujii | Affinity of rhodopsin to raft enables the aligned oligomer formation fro
m dimers: Coarse-grained molecular dynamics simulation of disk membranes | PLoS One. 2020 Feb 7;15(2):e0226123. | 32032370 | doi: 10.1371/journal.pone.0226123. |
| 14 | 漆原 範子 | Noriko Urushibara | Novel staphylococcal cassette chromosome mec (SCCmec) type XIV (5A) and a truncated SCCmec element in SCC composite islands carrying speG in ST5 MRSA in Japan. | J Antimicrob Chemother. 2020 Jan 1;75(1):46-50. | 31617906 | doi: 10.1093/jac/dkz406. |
| 15 | 西山 智明 | Tomoaki Nishiyama | Anthoceros genomes illuminate the origin of land plants and the unique biology of hornworts | Nat Plants. 2020 Mar;6(3):259-272. | 32170292 | doi: 10.1038/s41477-020-0618-2. |
| 16 | 青木 誠志郎 | Seishiro Aoki | Assessment of Polygala paniculata (Polygalaceae) characteristics for evolutionary studies of legume-rhizobia symbiosis. | J Plant Res. 2020 Jan;133(1):109-122. | 31828682 | doi: 10.1007/s10265-019-01159-x. |
| 17 | 松井 求, 岩崎 渉 | Motomu Matsui,Wataru Iwasaki | Graph Splitting: A Graph-Based Approach for Superfamily-Scale Phylogenetic Tree Reconstruction | Syst Biol. 2020 Mar 1;69(2):265-279. | 31364707 | doi: 10.1093/sysbio/syz049. |
| 18 | 末永 俊和 | Toshikazu Suenaga | Complete Genome Sequence of Pseudomonas putida Strain TS312, Harboring a HdtS-Type N-Acyl-Homoserine Lactone Synthase, Isolated from a Paper Mill | Microbiol Resour Announc. 2020 Mar 26;9(13):e00055-20. | 32217673 | doi: 10.1128/MRA.00055-20. |
| 19 | 中村 圭吾, 草間 和哉 | Keigo Nakamura,Kazuya Kusama | IFNT-independent effects of intrauterine extracellular vesicles (EVs) in cattle. | Reproduction. 2020 May;159(5):503-511. | 32103820 | doi: 10.1530/REP-19-0314. |
| 20 | 井口 亮 | Akira Iguchi | Deep-sea amphipods around cobalt-rich ferromanganese crusts: Taxonomic diversity and selection of candidate species for connectivity analysis | PLoS One. 2020 Feb 6;15(2):e0228483. | 32027722 | doi: 10.1371/journal.pone.0228483. |
| 21 | 瀬川 高弘 | Takahiro Segawa | Evaluation of reported sediment samples from 20 Ma using a molecular phylogenetic approach: comment on Liu et al. (2017) | Environ Microbiol. 2020 Mar;22(3):813-818. | 31984637 | doi: 10.1111/1462-2920.14923. |
| 22 | 藤田 賢一 | Ken-Ichi Fujita | URH49 exports mRNA by remodeling complex formation and mediating the NXF1-dependent pathway. | Biochim Biophys Acta Gene Regul Mech. 2020 Feb;1863(2):194480. | 31917363 | doi: 10.1016/j.bbagrm.2020.194480. |
| 23 | 吉田 健太郎 | Kentaro Yoshida | Diploid genome differentiation conferred by RNA sequencing-based survey of genome-wide polymorphisms throughout homoeologous loci in Triticum and Aegilops | BMC Genomics. 2020 Mar 20;21(1):246. | 32192452 | doi: 10.1186/s12864-020-6664-3. |
| 24 | 佐藤 康成 | Yasunari Satoh | Characteristics of induced mutations in offspring derived from irradiated mouse spermatogonia and mature oocytes. | Sci Rep. 2020 Jan 8;10(1):37. | 31913321 | doi: 10.1038/s41598-019-56881-2. |
| 25 | 岩切 淳一 | Junichi Iwakiri | LncRNA-dependent nuclear stress bodies promote intron retention through SR protein phosphorylation | EMBO J. 2020 Feb 3;39(3):e102729. | 31782550 | doi: 10.15252/embj.2019102729. |
| 26 | 黒田 大祐 | Daisuke Kuroda | How the protonation state of a phosphorylated amino acid governs molecular recognition: insights from classical molecular dynamics simulations | FEBS Lett. 2020 Mar;594(5):903-912. | 31713840 | doi: 10.1002/1873-3468.13674. |
| 27 | 佐藤 賢二 | Kenji Satou | Classification of Brainwaves for Sleep Stages by High-Dimensional FFT Features from EEG Signals | Appl. Sci. 2020, 10(5), 1797. | NULL | doi: 10.3390/app10051797 |
| 28 | 鈴木 真也 | Shinya Suzuki | Probabilistic model based on circular statistics for quantifying coverage depth dynamics originating from DNA replication | PeerJ. 2020 Mar 27;8:e8722. | 32257635 | doi: 10.7717/peerj.8722. |
| 29 | 吉田 光範 | Mitsunori Yoshida | Complete Genome Sequence of Mycobacterium xenopi JCM15661T, Obtained Using Nanopore and Illumina Sequencing Technologies | Microbiol Resour Announc. 2020 Mar 5;9(10):e01583-19. | 32139563 | doi: 10.1128/MRA.01583-19. |
| 30 | 神沼 英里, 中村 保一 | Eli Kaminuma, Yasukazu Nakamura | DDBJ Data Analysis Challenge: a machine learning competition to predict Arabidopsis chromatin feature annotations from DNA sequences. | Genes Genet Syst. 2020 Apr 22;95(1):43-50. | 32213716 | doi: 10.1266/ggs.19-00034. |
| 31 | 高田 美信 | Yoshinobu Takada | Characterization of self-incompatible Brassica napus lines lacking SP11 expression | Genes Genet Syst. 2020 Aug 27;95(3):111-118. | 32493878 | doi: 10.1266/ggs.19-00050. |
| 32 | 佐藤 行人 | Yukuto Sato | Development of 22 Microsatellite Markers for Assessing Hybridization in the Genus Gekko (Squamata: Gekkonidae) | Current Herpetology 39(1): 66-74, February 2020. | NULL | doi.org/10.5358/hsj.39.66 |
| 33 | 上田 真保子 | Mahoko Takahashi Ueda | Efficient differentiation and polarization of primary cultured neurons on poly(lactic acid) scaffolds with microgrooved structures. | Sci Rep. 2020 Apr 21;10(1):6716. | 32317746 | doi: 10.1038/s41598-020-63537-z. |
| 34 | 福多 賢太郎 | Kentaro Fukuta | The Genetic Basis of Morphological Diversity in Domesticated Goldfish | Curr Biol. 2020 Jun 22;30(12):2260-2274.e6. | 32392470 | doi: 10.1016/j.cub.2020.04.034. |
| 35 | 鳥丸 猛 | Takeshi Torimaru | Assessments of fine-scale spatial patterns of SNPs in an old-growth beech forest | Heredity (Edinb). 2020 Oct;125(4):240-252. | 32606418 | doi: 10.1038/s41437-020-0334-8. |
| 36 | 根本 理子, 小布施 祈織 | Michiko Nemoto,Kiori Obuse | Comparative Gene Analysis Focused on Silica Cell Wall Formation: Identification of Diatom-Specific SET Domain Protein Methyltransferases | Mar Biotechnol (NY). 2020 Aug;22(4):551-563. | 32488507 | doi: 10.1007/s10126-020-09976-1. |
| 37 | 松尾 芳隆 | Yoshitaka Matsuo | RQT complex dissociates ribosomes collided on endogenous RQC substrate SDD1 | Nat Struct Mol Biol. 2020 Apr;27(4):323-332. | 33001289 | doi: 10.1007/s10126-020-09976-1. |
| 38 | 松尾 芳隆 | Yoshitaka Matsuo | The Ccr4-Not complex monitors the translating ribosome for codon optimality | Science. 2020 Apr 17;368(6488):eaay6912. | 32299921 | doi: 10.1126/science.aay6912. |
| 39 | 松尾 芳隆 | Yoshitaka Matsuo | Ribosomal protein S7 ubiquitination during ER stress in yeast is associated with selective mRNA translation and stress outcome | Sci Rep. 2020 Nov 12;10(1):19669. | 33184379 | doi: 10.1038/s41598-020-76239-3. |
| 40 | 美世 一守, 岩崎 渉 | Kazumori Mise,Wataru Iwasaki | Environmental atlas of prokaryotes enables powerful and intuitive habitat-based analysis of community structures. | iScience. 2020 Sep 29;23(10):101624. | 33117966 | doi: 10.1016/j.isci.2020.101624. |
| 41 | 矢原 耕史 | Koji Yahara | Shotgun metagenome sequencing identification of a set of genes encoded by Actinomyces associated with medication-related osteonecrosis of the jaw | PLoS One. 2020 Nov 30;15(11):e0241676. | 33253207 | doi: 10.1371/journal.pone.0241676. |
| 42 | 久米 慶太郎 | Keitaro Kume | Mitochondrial Genomes of Hemiarma marina and Leucocryptos marina Revised the Evolution of Cytochrome c Maturation in Cryptista | ORIGINAL RESEARCH published: 02 June 2020. | NULL | doi.org/10.3389/fevo.2020.00140 |
| 43 | 久米 慶太郎 | Keitaro Kume | Barthelonids represent a deep-branching metamonad clade with mitochondrion-related organelles predicted to generate no ATP | Proc Biol Sci. 2020 Sep 9;287(1934):20201538. | 32873198 | doi: 10.1098/rspb.2020.1538. |
| 44 | SHENTON MATTHEW | Matt Shenton | Evolution and Diversity of the Wild Rice Oryza officinalis Complex, across Continents, Genome Types, and Ploidy Levels | Genome Biol Evol. 2020 Apr 1;12(4):413-428. | 32125373 | doi: 10.1093/gbe/evaa037. |
| 45 | 浜端 朋子 | Tomoko Hamabata | Natal origin identification of green turtles in the North Pacific by genome-wide population analysis with limited DNA samples | ORIGINAL RESEARCH published: 07 August 2020. | NULL | doi.org/10.3389/fmars.2020.00658 |
| 46 | 福永 津嵩, 岩崎 渉 | Tsukasa Fukunaga,Wataru Iwasaki | Logicome Profiler: Exhaustive detection of statistically significant logic relationships from comparative omics data | PLoS One. 2020 May 1;15(5):e0232106. | 32357172 | doi: 10.1371/journal.pone.0232106. |
| 47 | 土屋 貴穂, 秋光 信佳 | Takaho Tsuchiya,Nobuyoshi Akimitsu | Stability of RNA sequences derived from the coronavirus genome in human cells | Biochem Biophys Res Commun. 2020 Jul 5;527(4):993-999. | 32446559 | doi: 10.1016/j.bbrc.2020.05.008. |
| 48 | 松前 ひろみ | Hiromi Matsumae | Ancient Jomon genome sequence analysis sheds light on migration patterns of early East Asian populations | Commun Biol. 2020 Aug 25;3(1):437. | 32843717 | doi: 10.1038/s42003-020-01162-2. |
| 49 | 古舘 健 | Ken Furudate | Clonal evolution of acute myeloid leukemia revealed by high-throughput single-cell genomics | Nat Commun. 2020 Oct 21;11(1):5327. | 33087716 | doi: 10.1038/s41467-020-19119-8 |
| 50 | 遠藤 明仁 | Akihito Endo | Kunkecin A, a New Nisin Variant Bacteriocin Produced by the Fructophilic Lactic Acid Bacterium, Apilactobacillus kunkeei FF30-6 Isolated From Honey Bees | Front Microbiol. 2020 Sep 16;11:571903. | 32493209 | doi: 10.1186/s12866-020-01830-7 |
| 51 | 遠藤 明仁 | Akihito Endo | PCR-based screening, isolation, and partial characterization of motile lactobacilli from various animal feces | BMC Microbiol. 2020 Jun 3;20(1):142. | 32493209 | doi: 10.1186/s12866-020-01830-7 |
| 52 | 高木 亙 | Wataru Takagi | Facilitated NaCl Uptake in the Highly Developed Bundle of the Nephron in Japanese Red Stingray Hemitrygon akajei Revealed by Comparative Anatomy and Molecular Mapping | Zoolog Sci. 2020 Oct;37(5):458-466. | 32972087 | doi: 10.2108/zs200038 |
| 53 | 鈴木 郁夫 | Ikuo Suzuki | YIPF5 mutations cause neonatal diabetes and microcephaly through endoplasmic reticulum stress | J Clin Invest. 2020 Dec 1;130(12):6338-6353. | 33164986 | doi: 10.1172/JCI141455 |
| 54 | 西原 昌宏, 田崎 啓介 | Masahiro Nishihara, Keisuke Tasaki | Molecular characterization of an anthocyanin-related glutathione S- transferase gen
e in Japanese gentian with the CRISPR/Cas9 system | BMC Plant Biol. 2020 Aug 6;20(1):370. | 32762648 | doi: 10.1186/s12870-020-02565-3 |
| 55 | 谷澤 靖洋, 中村 保一, 遠野 雅徳 | Yasuhiro Tanizawa,Yasukazu Nakamura,Masanori Tohno | Lactobacillus buchneri subsp. silagei subsp. nov., isolated from rice grain silage
. | Int J Syst Evol Microbiol. 2020 May;70(5):3111-3116. | 32250236 | doi: 10.1099/ijsem.0.004138 |
| 56 | 谷澤 靖洋, 中村 保一 | Yasuhiro Tanizawa,Yasukazu Nakamura,Masanori Tohno | Whole-exome sequencing of 79 xenografts as a potential approach for the identification of genetic variants associated with sensitivity to cytotoxic anticancer drugs. | PLoS One. 2020 Sep 28;15(9):e0239614. | 32986753 | doi: 10.1371/journal.pone.0239614 |
| 57 | 佐藤 晋也 | Shinya Sato | Genome-enabled phylogenetic and functional reconstruction of an araphid pennate diatom Plagiostriata sp. CCMP470, previously assigned as a radial centric diatom, and its bacterial commensal | Sci Rep. 2020 Jun 10;10(1):9449. | 32523048 | doi: 10.1038/s41598-020-65941-x |
| 58 | 福島 健児 | Kenji Fukushima | Amalgamated cross-species transcriptomes reveal organ-specific propensity in gene expression evolution | Nat Commun. 2020 Sep 8;11(1):4459. | 32900997 | doi: 10.1038/s41467-020-18090-8 |
| 59 | 安河内 彦輝 | Yoshiki Yasukochi | Transcriptomic changes in young Japanese males after exposure to acute hypobaric hypoxia | Front Genet. 2020 Sep 8;11:559074. | 33101380 | doi: 10.3389/fgene.2020.559074 |
| 60 | 小林 和也 | Kazuya Kobayashi | Dimorphic flowers modify the visitation order of pollinators from male to female flowers | Sci Rep. 2020 Jun 19;10(1):9965. | 32561882 | doi: 10.1038/s41598-020-66525-5 |
| 61 | 加藤 有己 | Yuki Kato | A comparative analysis of ADAR mutant mice reveals site-specific regulation of RNA editing | RNA. 2020 Apr;26(4):454-469. | 31941663 | doi: 10.1261/rna.072728.119 |
| 62 | 加藤 有己 | Yuki Kato | ADAR1 regulates early T cell development via MDA5-dependent and -independent pathways | J Immunol. 2020 Apr 15;204(8):2156-2168. | 32169840 | doi: 10.4049/jimmunol.1900929 |
| 63 | 宮澤 清太 | Seita Miyazawa | Pattern blending enriches the diversity of animal colorations | Sci Adv. 2020 Dec 2;6(49):eabb9107 | 33268371 | doi: 10.1126/sciadv.abb9107 |
| 64 | 来見田 遥一, 齋藤 裕 | Yoichi Kurumida,Yutaka Saito | Predicting antibody affinity changes upon mutations by combining multiple predictors | Sci Rep.2020 Nov 11;10(1):19533 | 33177627 | doi: 10.1038/s41598-020-76369-8 |
| 65 | 西井 かなえ | Kanae Nishii | QTL dissection of floral traits in Streptocarpus (Gesneriaceae) | Netherlands Journal of Plant Breeding, 01 Jul 2020, 216(7):110 | NULL | doi: 10.1007/s10681-020-02647-1 |
| 66 | 大島 一里 | Kazusato Ohshima | The evolutionary history and global spatio-temporal dynamics of potato virus Y | Virus Evol. 2020 Nov 21;6(2):veaa056 | 33324488 | doi: 10.1093/ve/veaa056 |
| 67 | 竹下 和貴 | Kazutaka Takeshita | Genomic Comparison of Insect Gut Symbionts from Divergent Burkholderia Subclades | Genes (Basel). 2020 Jul 3;11(7):744. | 32635398 | doi: 10.3390/genes11070744 |
| 68 | 笠原 浩太 | Kota Kasahara | myPresto/omegagene 2020: a molecular dynamics simulation engine for virtual-system coupled sampling | Biophys Physicobiol. 2020 Oct 15;17:140-146. | 33240741 | doi: 10.2142/biophysico.BSJ-2020013 |
| 69 | 曽 超 | Chao Zeng | RNA-seq analysis reveals localization-associated alternative splicing across 13 cell lines | Genes (Basel). 2020 Jul 18;11(7):820. | 32708427 | doi: 10.3390/genes11070820 |
| 70 | 齋藤 裕 | Yutaka Saito | Existence and possible roles of independent non-CpG methylation in the mammalian brain | DNA Res. 2020 Aug 1;27(4):dsaa020. | 33524135 | doi: 10.1093/dnares/dsaa020 |
| 71 | Rai Amit, ライ メガ | Amit Rai,Megha Rai | Multiomics-based characterization of specialized metabolites biosynthesis in Cornus Officinalis | DNA Res. 2020 Apr 1;27(2):dsaa009. | 32426807 | doi: 10.1093/dnares/dsaa009. |
| 72 | 佐藤 行人 | Yukuto Sato | Understanding leptospirosis eco-epidemiology by environmental DNA metabarcoding of irrigation water from two agro-ecological regions of Sri Lanka | PLoS Negl Trop Dis. 2020 Jul 23;14(7):e0008437. | 32701971 | doi: 10.1371/journal.pntd.0008437 |
| 73 | 佐藤 行人 | Yukuto Sato | Population genetic structure and evolution of Batesian mimicry in Papilio polytes from the Ryukyu Islands, Japan, analyzed by genotyping‐by‐sequencing | Ecol Evol. 2020 Dec 24;11(2):872-886. | 33520172 | doi: 10.1002/ece3.7092 |
| 74 | 郷 康広 | Yasuhiro Go | Redundant type II cadherins define neuroepithelial cell states for cytoarchitectonic robustness. | Commun Biol. 2020 Oct 15;3(1):574. | 33060832 | doi: 10.1038/s42003-020-01297-2 |
| 75 | 郷 康広 | Yasuhiro Go | Transcriptome analysis revealed misregulated gene expression in blastoderms of interspecific chicken and Japanese quail F1 hybrids | PLoS One. 2020 Oct 12;15(10):e0240183. | 33044996 | doi: 10.1371/journal.pone.0240183 |
| 76 | 郷 康広 | Yasuhiro Go | AUTS2 regulation of synapses for proper synaptic inputs and social communication | iScience. 2020 Jun 26;23(6):101183. | 32498016 | doi: 10.1016/j.isci.2020.101183 |
| 77 | 藤井 雅史, 土屋 貴穂, 黒田 真也 | Masashi Fujii,Takaho Tsuchiya,Shinya Kuroda | Transomics analysis reveals allosteric and gene regulation axes for altered hepatic glucose-responsive metabolism in obesity | Sci Signal. 2020 Dec 1;13(660):eaaz1236. | 33262292 | doi: 10.1126/scisignal.aaz1236 |
| 78 | 藤井 雅史, 黒田 真也 | Masashi Fujii,Shinya Kuroda | Monitoring and mathematical modeling of mitochondrial ATP in myotubes at single-cell level reveals two distinct population with different kinetics | Quantitative Biology 2020, 8(3): 228-237 | NULL | doi: 10.1007/s40484-020-0211-8 |
| 79 | 近藤 伸二, 水口 洋平, 豊田 敦 | Shinji Kondo,Yohei Minakuchi,Atsushi Toyoda | Comparative genomic analyses illuminate the distinct evolution of megabats within Chiroptera | DNA Res. 2020 Aug 1;27(4):dsaa021. | 32966557 | doi: 10.1093/dnares/dsaa021 |
| 80 | 水口 洋平, 豊田 敦 | Yohei Minakuchi, Atsushi Toyoda | A genome database for a Japanese population of the larvacean Oikopleura dioica | Dev Growth Differ. 2020 Aug;62(6):450-461. | 32677034 | doi: 10.1111/dgd.12689 |
| 81 | 滝沢 拓己, 岩切 淳一 | Hiroki Takizawa,Junichi Iwakiri | RintC: fast and accuracy-aware decomposition of distributions of RNA secondary structures with extended logsumexp | BMC Bioinformatics. 2020 May 24;21(1):210. | 32448174 | doi: 10.1186/s12859-020-3535-5 |
| 82 | 滝沢 拓己, 岩切 淳一 | Hiroki Takizawa,Junichi Iwakiri | Finding the direct optimal RNA barrier energy and improving pathways with an arbitrary energy model | Bioinformatics. 2020 Jul 1;36(Suppl_1):i227-i235. | 32657400 | doi: 10.1093/bioinformatics/btaa469 |
| 83 | 山崎 曜 | Yo Y Yamasaki | Ecosystem size predicts the probability of speciation in migratory freshwater fish | Mol Ecol. 2020 Aug;29(16):3071-3084. | 32168408 | doi: 10.1111/mec.15415 |
| 84 | 山﨑 曜 | Yo Y Yamasaki | Genome-wide patterns of divergence and introgression after secondary contact between Pungitius sticklebacks | Philos Trans R Soc Lond B Biol Sci. 2020 Aug 31;375(1806):20190548. | 32654635 | doi: 10.1098/rstb.2019.0548 |
| 85 | 寺井 悟朗 | Goro Terai | Improving the prediction accuracy of protein abundance in Escherichia coli using mRNA accessibility | Nucleic Acids Res. 2020 Aug 20;48(14):e81. | 32504488 | doi: 10.1093/nar/gkaa481 |
| 86 | 寺井 悟朗 | Goro Terai | Exchange of endogenous and heterogeneous yeast terminators in Pichia pastoris to tune mRNA stability and gene expression | Nucleic Acids Res. 2020 Dec 16;48(22):13000-13012. | 33257988 | doi: 10.1093/nar/gkaa1066 |
| 87 | 杉原 優 | Yu Sugihara | Genome analyses reveal the hybrid origin of the staple crop white Guinea yam (Dioscorea rotundata) | Proc Natl Acad Sci U S A. 2020 Dec 15;117(50):31987-31992. | 33268496 | doi: 10.1073/pnas.2015830117 |
| 88 | 小野口 玲菜, 秋光 信佳 | Rena Onoguchi-Mizutani,Nobuyoshi Akimitsu | Long noncoding RNA U90926 is crucial for herpes simplex virus type 1 proliferation in murine retinal photoreceptor cells. | Sci Rep. 2020 Nov 10;10(1):19406. | 33173149 | doi: 10.1038/s41598-020-76450-2 |
| 89 | 秋光 信佳, 川田 健太郎 | Kentaro Kawata,Nobuyoshi Akimitsu | Metabolic labeling of RNA using multiple ribonucleoside analogs enables the simultaneous evaluation of RNA synthesis and degradation rates. | Genome Res. 2020 Oct;30(10):1481-1491. | 32843354 | doi: 10.1101/gr.264408.120 |
| 90 | 秋光 信佳 | Nobuyoshi Akimitsu | Systematic Analysis of Targets of Pumilio-mediated mRNA Decay Reveals that PUM1 Repression by DNA Damage Activates Translesion Synthesis | Cell Rep. 2020 May 5;31(5):107542. | 32375027 | doi: 10.1016/j.celrep.2020.107542 |
| 91 | 高橋 鉄美 | Tetsumi Takahashi | A ddRAD-based population genetics and phylogenetics of an endangered freshwater fish from Japan | Conservation Genetics (2020) 21:641-652 | NULL | doi:10.1007/s10592-020-01275-5 |
| 92 | 横溝 匠 | Takumi Yokomizo | Changes in transcriptomic response to salinity stress induce the brackish water adaptation in a freshwater snail | Sci Rep. 2020 Sep 29;10(1):16049. | 32994494 | doi: 10.1038/s41598-020-73000-8 |
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