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Published Papers(2018)

List of papers published by users January 1st, 2018 -- December 31st, 2018

Papers compiled at the end-of-year renewal in 2018

Supercomputer users in authors list (Japanese)Supercomputer users in authors listTitleJournal, Volume, Number, PagesPMIDDOI
1大里 直樹Naoki OsatoCharacteristics of functional enrichment and gene expression level of human putative transcriptional target genesBMC Genomics. 2018 Jan 19;19(Suppl 1):957.29363429doi:10.1186/s12864-017-4339-5.
2大田達郎,川島 武士, 佐藤 行人, 岩崎 渉Tazro Ohta,Takeshi Kawashima,Yukuto Sato,Wataru IwasakiCollaborative environmental DNA sampling from petal surfaces of flowering cherry Cerasus × yedoensis 'Somei-yoshino' across the Japanese archipelagoJ Plant Res. 2018 Jul;131(4):709-717.29460198doi:10.1007/s10265-018-1017-x.
3佐藤 行人Yukuto SatoComparing local- and regional-scale estimations of thediversity of stream fish using eDNA metabarcoding andconventional observation methodsFreshwater Biology:27 February 2018;Volume63, Issue6 Pages 569-580NULLdoi.org/10.1111/fwb.13094
4中山 省悟Shogo NakayamaDegradation of the endoplasmic reticulum-anchored transcription factor MyRF by the ubiquitin ligase SCFFbxw7 in a manner dependent on the kinase GSK-3J Biol Chem. 2018 Apr 13;293(15):5705-5714.29472293doi: 10.1074/jbc.RA117.000741.
5瀬川 高弘Takahiro SegawaDemographic analysis of cyanobacteria based on the mutation rates estimated from an ancient ice coreHeredity (Edinb). 2018 Jun;120(6):562-573. 29302050doi: 10.1038/s41437-017-0040-3.
6山田 和範Kazunori D YamadaDerivative-free neural network for optimizing the scoring functions associated with dynamic programming of pairwise-profile alignmentAlgorithms Mol Biol. 2018 Feb 15;13:5.29467815doi: 10.1186/s13015-018-0123-6
7上田 真保子Mahoko Takahashi UedaDifferent effects of two mutations on the infectivity of Ebola virus glycoprotein in nine mammalian speciesJ Gen Virol. 2018 Feb;99(2):181-186.29300152doi: 10.1099/jgv.0.000999.
8笠原 浩太Kota KasaharaEnhanced Sampling of Molecular Dynamics Simulations of a Polyalanine Octapeptide: Effects of the Periodic Boundary Conditions on Peptide ConformationJ Phys Chem B. 2018 Mar 8;122(9):2495-2503. 29439570doi: 10.1021/acs.jpcb.7b10830.
9二階堂 雅人Masato NikaidoEvolution of vomeronasal receptor 1 ( V1R ) genes in the common marmoset (Callithrix jacchus)Gene. 2018 Feb 5;642:343-353.29155331doi: 10.1016/j.gene.2017.11.048.
10孫 建強Jianqiang SunHigh-Throughput Sequencing of the Expressed Torafugu (Takifugu rubripes) Antibody Sequences Distinguishes IgM and IgT Repertoires and Reveals Evidence of Convergent EvolutionFront Immunol. 2018 Feb 21;9:251.29515575doi: 10.3389/fimmu.2018.00251.
11前原 一満Kazumitsu MaeharaHistone H3.3 sub-variant H3mm7 is required for normal skeletal muscle regenerationNature Communications volume 9, Article number: 1400 (2018)29643389doi.org/10.1038/s41467-018-03845-1
12吉田 聡子Satoko YoshidaHost lignin composition affects haustorium induction in the parasitic plants Phtheirospermum japonicum and Striga hermonthicaNew Phytol. 2018 Apr;218(2):710-723. 29498051doi: 10.1111/nph.15033.
13吉田 聡子Satoko YoshidaRegulation and functional diversification of root hairsSemin Cell Dev Biol. 2018 Nov;83:115-122.28993253doi: 10.1016/j.semcdb.2017.10.003.
14吉田 聡子Satoko YoshidaTranscriptomic and metabolomic reprogramming from roots to haustoria in the parasitic plant, Thesium chinensePlant Cell Physiol. 2018 Apr 1;59(4):724-733.29281058doi: 10.1093/pcp/pcx200.
15岩切 淳一Junichi IwakiriIdentification of Transposable Elements Contributing to Tissue-Specific Expression of Long Non-Coding RNAsGenes (Basel). 2018 Jan 9;9(1):23.29315213doi: 10.3390/genes9010023.
16遠藤 明仁Akihito EndoIn vitro and in silico characterisation of Lactobacillus paraplantarum D2-1, a starter culture for soymilk fermentationInt J Food Sci Nutr. 2018 Nov;69(7):857-869.29318897doi: 10.1080/09637486.2017.1422701.
17白 汝嵐Rulan BaiInduction of immune-related gene expression by seminal exosomes in the porcine endometriumBiochem Biophys Res Commun. 2018 Jan 1;495(1):1094-1101.29155178doi: 10.1016/j.bbrc.2017.11.100.
18水口 洋平Yohei MinakuchiMining of the Uncharacterized Cytochrome P450 Genes Involved in Alkaloid Biosynthesis in California Poppy Using a Draft Genome SequencePlant Cell Physiol. 2018 Feb 1;59(2):222-233. 29301019doi: 10.1093/pcp/pcx210.
19山川 博幹Hiromoto YamakawaMutMapPlus identified novel mutant alleles of a rice starch branching enzyme IIb gene for fine-tuning of cooked rice texturePlant Biotechnol J. 2018 Jan;16(1):111-123.28499068doi: 10.1111/pbi.12753.
20飯田 哲史Tetsushi IidaMutation in fission yeast phosphatidylinositol 4-kinase Pik1 is synthetically lethal with defect in telomere protection protein Pot1Biochem Biophys Res Commun. 2018 Feb 19;496(4):1284-1290.29410177doi: 10.1016/j.bbrc.2018.02.001.
21瀬川 高弘Takahiro SegawaNitrogen Cycle Evaluation (NiCE) Chip for the Simultaneous Analysis of Multiple N-Cycle Associated GenesAppl Environ Microbiol. 2018 Apr 2;84(8):e02615-17.29427421doi: 10.1128/AEM.02615-17.
22高松 壮Takeshi TakamatsuOptimized Method of Extracting Rice Chloroplast DNA for High-Quality Plastome Resequencing and de Novo AssemblyFront Plant Sci. 2018 Feb 28;9:266.29541088doi: 10.3389/fpls.2018.00266.
23中村 司Tsukasa NakamuraParallelization of MAFFT for large-scale multiple sequence alignmentsBioinformatics. 2018 Jul 15;34(14):2490-2492.29506019doi: 10.1093/bioinformatics/bty121.
24笠原 浩太Kota KasaharaPhosphorylation of an intrinsically disordered region of Ets1 shifts a multi-modal interaction ensemble to an auto-inhibitory stateNucleic Acids Res. 2018 Mar 16;46(5):2243-2251.29309620doi: 10.1093/nar/gkx1297.
25黒田 大祐Daisuke KurodaRepertoire analysis of antibody CDR-H3 loops suggests affinity maturation does not typically result in rigidificationFront Immunol. 2018 Mar 2;9:413.29545810doi: 10.3389/fimmu.2018.00413.
26熊谷 洋平, 岩崎 渉Yohei Kumagai,Wataru IwasakiSolar-panel and parasol strategies shape the proteorhodopsin distribution pattern in marine FlavobacteriiaISME J. 2018 May;12(5):1329-1343.29410487doi: 10.1038/s41396-018-0058-4.
27中村 司Tsukasa NakamuraTemplate-based quaternary structure prediction of proteins using enhanced profile-profile alignmentsProteins. 2018 Mar;86 Suppl 1(Suppl Suppl 1):274-282. 29178285doi: 10.1002/prot.25432.
28加藤 毅Tsuyoshi KatoVirus Particle Detection by Convolutional Neural Network in Transmission Electron Microscopy ImagesFood Environ Virol. 2018 Jun;10(2):201-208.29352405doi: 10.1007/s12560-018-9335-7.
29原 雄一郎Yuichiro HaraMadagascar ground gecko genome analysis characterizes asymmetric fates of duplicated genesBMC Biol. 2018 Apr 16;16(1):40.29661185doi: 10.1186/s12915-018-0509-4.
30小柳 亮Ryo Koyanagi Review of Schismatogobius (Gobiidae) from Japan, with the description of a new speciesIchthyological Research volume 65, pages56-77 (2018)NULLdoi.org/10.1007/s10228-017-0593-4
31松前 ひろみHiromi MatsumaeThe prehistoric peopling of Southeast Asia.Science. 2018 Jul 6;361(6397):88-92.29976827doi: 10.1126/science.aat3628.
32浜田 道昭Michiaki HamadaBeyond similarity assessment: selecting the optimal model for sequence alignment via the Factorized Asymptotic Bayesian algorithm.Bioinformatics. 2018 Feb 15;34(4):576-584.29040374doi: 10.1093/bioinformatics/btx643.
33北住愛, 中村 保一Ai Kitazumi,Yasukazu NakamuraPotential of Oryza officinalis to augment the cold tolerance genetic mechanisms of Oryza sativa by network complementationScientific Reports volume 8, Article number: 16346 (2018)NULLdoi.org/10.1038/s41598-018-34608-z
34吉田 光範Mitsunori YoshidaComplete Genome Sequence of a Type Strain of Mycobacterium abscessus subsp. bolletii, a Member of the Mycobacterium abscessus Complex.Genome Announc. 2018 Feb 1;6(5):e01530-17. 29437099doi: 10.1128/genomeA.01530-17.
35岩切 淳一Junichi IwakiriCapturing alternative secondary structures of RNA by decomposition of base-pairing probabilitiesBMC Bioinformatics. 2018 Feb 19;19(Suppl 1):38.29504917doi: 10.1186/s12859-018-2018-4.
36坊農 秀雅Hidemasa BonoConstruction of a simple evaluation system for the intestinal absorption of an orally administered medicine using Bombyx mori larvae.Drug Discov Ther. 2018;12(1):7-15.29553084doi: 10.5582/ddt.2018.01004.
37黒田 真也Shinya Kuroda Increase in hepatic and decrease in peripheral insulin clearance characterize abnormal temporal patterns of serum insulin in diabetic subjectsNPJ Syst Biol Appl. 2018 Mar 14;4:14.29560274doi: 10.1038/s41540-018-0051-6.
38岩崎 渉Wataru IwasakiMitoFish and MiFish pipeline: a mitochondrial genome database of fish with an analysis pipeline for environmental DNA metabarcoding.Mol Biol Evol. 2018 Jun 1;35(6):1553-1555. 29668970doi: 10.1093/molbev/msy074.
39加藤 有己Yuki KatoMyotube-derived factor promotes oligodendrocyte precursor cell proliferationBiochem Biophys Res Commun. 2018 Jun 7;500(3):609-613.29679562doi: 10.1016/j.bbrc.2018.04.118.
40大貫 慎輔Shinsuke OhnukiHigh-dimensional single-cell phenotyping reveals extensive haploinsufficiency.PLoS Biol. 2018 May 16;16(5):e2005130.29768403doi: 10.1371/journal.pbio.2005130.
41吉田 光範Mitsunori YoshidaComplete Genome Sequence of Mycobacterium marinum ATCC927T, Obtained Using Nanopore and Illumina Sequencing TechnologiesGenome Announc. 2018 May 17;6(20):e00397-18.29773624doi: 10.1128/genomeA.00397-18.
42笠原 浩太Kota KasaharaUnfolding of α-helical 20-residue poly-glutamic acid analyzed by multiple runs of canonical molecular dynamics simulationsPeerJ. 2018 May 15;6:e4769.29780670doi: 10.7717/peerj.4769.
43谷澤 靖洋,遠藤 明仁Yasuhiro Tanizawa,Akihito EndoComparative analysis of probiotic bacteria based on a new definition of core genomeJ Bioinform Comput Biol. 2018 Jun;16(3):1840012.29792377doi: 10.1142/S0219720018400127.
44曽 超Chao ZengIdentification and analysis of ribosome-associated lncRNAs using ribosome profiling dataBMC Genomics. 2018 May 29;19(1):414.29843593doi: 10.1186/s12864-018-4765-z.
45吉田 光範Mitsunori YoshidaNaturally occurring a loss of a giant plasmid from Mycobacterium ulcerans subsp. shinshuense makes it non-pathogenic.Sci Rep. 2018 May 29;8(1):8218.29844323doi: 10.1038/s41598-018-26425-1
46濱田 麻友子Mayuko HamadaMetabolic co-dependence drives the evolutionarily ancient Hydra-Chlorella symbiosisElife. 2018 May 31;7:e35122.29848439doi: 10.7554/eLife.35122.
47東 光一Koichi HigashiLatent environment allocation of microbial community dataPLoS Comput Biol. 2018 Jun 6;14(6):e1006143. 29874232doi: 10.1371/journal.pcbi.1006143.
48杉本 のぞみ,吉田 和真Nozomi Sugimoto,Kazumasa YoshidaGenome-wide analysis of the spatiotemporal regulation of firing and dormant replication origins in human cells.Nucleic Acids Res. 2018 Jul 27;46(13):6683-6696.29893900doi: 10.1093/nar/gky476.
49郷 康広Yasuhiro GoHuman-specific features of spatial gene expression and regulation in eight brain regions.Genome Res. 2018 Aug;28(8):1097-1110.29898898doi: 10.1101/gr.231357.117.
50竹崎 直子Naoko TakezakiGlobal Rate Variation in Bony VertebratesGenome Biol Evol. 2018 Jul 1;10(7):1803-1815.29931060doi: 10.1093/gbe/evy125.
51福永 津嵩Tsukasa FukunagaA novel method for assessing the statistical significance of RNA-RNA interactions between two long RNAsJ Comput Biol. 2018 Sep;25(9):976-986.29963900doi: 10.1089/cmb.2017.0260.
52野澤 昌文Masafumi NozawaGene-by-Gene or Localized Dosage Compensation on the Neo-X Chromosome in Drosophila mirandaGenome Biol Evol. 2018 Aug 1;10(8):1875-1881. 29986000doi: 10.1093/gbe/evy148.
53広瀬 修Osamu HiroseSPF-CellTracker: Tracking Multiple Cells with Strongly-Correlated Moves Using a Spatial Particle FilterIEEE/ACM Trans Comput Biol Bioinform. Nov-Dec 2018;15(6):1822-1831.29990224doi: 10.1109/TCBB.2017.2782255.
54西山 智明,坂山 英俊Tomoaki Nishiyama,Hidetoshi SakayamaThe Chara genome: secondary complexity and implications for plant terrestrializationCell. 2018 Jul 12;174(2):448-464.e24.30007417doi: 10.1016/j.cell.2018.06.033.
55清水 徳朗Tokurou ShimizuQTL mapping of male sterility and transmission pattern in progeny of Satsuma mandarinPLoS One. 2018 Jul 17;13(7):e0200844.30016346doi: 10.1371/journal.pone.0200844.
56小保方 潤一Junichi ObokataCharacterization of spliced leader trans-splicing in a photosynthetic rhizarian amoeba, Paulinella micropora, and its possible role in functional gene transferPLoS One. 2018 Jul 19;13(7):e0200961.30024971doi: 10.1371/journal.pone.0200961.
57小野 肇Hajime OnoFunctional characterization of olfactory receptors in the Oriental fruit fly Bactrocera dorsalis that respond to plant volatilesInsect Biochem Mol Biol. 2018 Oct;101:32-46.30026095doi: 10.1016/j.ibmb.2018.07.002.
58渡邊 日佳流Hikaru WatanabeMinor taxa in human skin microbiome contribute to the personal identification.PLoS One. 2018 Jul 25;13(7):e0199947.30044822doi: 10.1371/journal.pone.0199947.
59矢原 耕史Koji YaharaGenomic surveillance of Neisseria gonorrhoeae to investigate the distribution and evolution of antimicrobial resistance determinants and lineagesMicrob Genom. 2018 Aug;4(8):e000205.30063202doi: 10.1099/mgen.0.000205.
60矢原 耕史Koji YaharaInvestigation of recombination-intense viral groups and their genes in the Earth's viromeSci Rep. 2018 Jul 31;8(1):11496.30065291doi: 10.1038/s41598-018-29272-2.
61田中 龍聖Ryusei TanakaBiology and genome of a newly discovered sibling species of Caenorhabditis elegans.Nat Commun. 2018 Aug 10;9(1):3216.30097582doi: 10.1038/s41467-018-05712-5.
62水口 洋平, 豊田 敦Yohei Minakuchi,Atsushi ToyodaEndoribonuclease ENDU-2 regulates multiple traits including cold tolerance via cell autonomous and nonautonomous controls in Caenorhabditis elegansProc Natl Acad Sci U S A. 2018 Aug 28;115(35):8823-8828.30104389doi: 10.1073/pnas.1808634115.
63山口 淳一Junichi YamaguchiThe Genomic Basis of Color Pattern Polymorphism in the Harlequin Ladybird.Curr Biol. 2018 Oct 22;28(20):3296-3302.e7.30146156doi: 10.1016/j.cub.2018.08.023.
64谷澤 靖洋, 遠藤 明仁, 遠野 雅徳Yasuhiro Tanizawa,Akihito Endo,Masanori TohnoLactobacillus paragasseri sp. nov., a sister taxon of Lactobacillus gasseri, based on whole-genome sequence analysesInt J Syst Evol Microbiol. 2018 Nov;68(11):3512-3517.30226464doi: 10.1099/ijsem.0.003020.
65熊谷 雄太郎Yutaro KumagaiWaves of chromatin modifications in mouse dendritic cells in response to LPS stimulationGenome Biol. 2018 Sep 19;19(1):138.30231913doi: 10.1186/s13059-018-1524-z.
66安藤 俊哉, 水口 洋平, 矢野 健太郎, 豊田 敦Toshiya Ando,Yohei Minakuchi,Kentaro Yano,Atsushi ToyodaRepeated inversions within a pannier intron drive diversification of intraspecific colour patterns of ladybird beetlesNat Commun. 2018 Sep 21;9(1):3843.30242156doi: 10.1038/s41467-018-06116-1.
67笠原 浩太Kota KasaharaInfluence of various parameters in the replica-exchange molecular dynamics method: Number of replicas, replica-exchange frequency, and thermostat coupling time constantBiophys Physicobiol. 2018 Aug 8;15:165-172.30250775doi: 10.2142/biophysico.15.0_165.
68黒田 真也Shinya KurodaTrans-omic Analysis Reveals Selective Responses to Induced and Basal Insulin across Signaling, Transcriptional, and Metabolic NetworksiScience. 2018 Sep 28;7:212-229.30267682doi: 10.1016/j.isci.2018.07.022.
69水口 洋平, 豊田 敦Yohei Minakuchi,Atsushi ToyodaAnisogamy evolved with a reduced sex-determining region in volvocine green algaeCommun Biol. 2018 Mar 8;1:17.30271904doi: 10.1038/s42003-018-0019-5.
70佐藤 大気, 河田 雅圭Daiki X Sato,Masakado KawataPositive and balancing selection on SLC18A1 gene associated with psychiatric disorders and human-unique personality traits.Evol Lett. 2018 Aug 21;2(5):499-510.30283697doi: 10.1002/evl3.81.
71加藤 有己Kato YukiADAR1-mediated RNA editing is required for thymic self-tolerance and prevention of autoimmunityEMBO Rep. 2018 Dec;19(12):e46303.30361393doi: 10.15252/embr.201846303.
72吉武 和敏Kazutoshi YoshitakeArtificially designed hybrids facilitate efficient generation of high-resolution linkage maps.Sci Rep. 2018 Oct 31;8(1):16104. 30382134doi: 10.1038/s41598-018-34431-6.
73中村 保一Yasukazu NakamuraPotential of Oryza officinalis to augment the cold tolerance genetic mechanisms of Oryza sativa by network complementation.Sci Rep. 2018 Nov 5;8(1):16346. 30397229doi: 10.1038/s41598-018-34608-z.
74吉田 健太郎Kentaro YoshidaRNA-seq analysis reveals considerable genetic diversity and provides genetic markers saturating all chromosomes in the diploid wild wheat relative Aegilops umbellulataBMC Plant Biol. 2018 Nov 8;18(1):271.30409135doi: 10.1186/s12870-018-1498-8.
75大里 直樹Naoki OsatoThe DPP-4 inhibitor, teneligliptin enhances brown adipose tissue function, leading to the prevention of obesity in miceFEBS Open Bio. 2018 Sep 19;8(11):1782-1793.30410858doi: 10.1002/2211-5463.12498.
76沖 真弥Shinya OkiChIP‐Atlas: a data‐mining suite powered by full integration of public ChIP‐seq data.EMBO Rep. 2018 Dec;19(12):e46255. 30413482doi: 10.15252/embr.201846255.
77石下 聡, 辰本 将司Satoshi Ishishita,Shoji TatsumotoNonsense mutation in PMEL is associated with yellowish plumage colour phenotype in Japanese quailSci Rep. 2018 Nov 13;8(1):16732.30425278doi: 10.1038/s41598-018-34827-4.
78湯山 育子Ikuko YuyamaTranscriptomic changes with increasing algal symbiont reveal the detailed process underlying establishment of coral-algal symbiosisSci Rep. 2018 Nov 14;8(1):16802.30429501doi: 10.1038/s41598-018-34575-5.
79鐘ケ江 弘美Hiromi Kajiya-KanegaeDescription of grain weight distribution leading to genomic selection for grain-fillingPLoS One. 2018 Nov 20;13(11):e0207627.30458025doi: 10.1371/journal.pone.0207627.
80吉田 健太郎Kentaro YoshidaRNA sequencing-based bulked segregant analysis facilitates D-genome marker development for a specific chromosomal region in the synthetic hexaploid wheatInt J Mol Sci. 2018 Nov 26;19(12):3749.30486239doi: 10.3390/ijms19123749.
81笠原 浩太Kota KasaharaCharacteristics of interactions at protein segments without non-local intramolecular contacts in the Protein Data BankPLoS One. 2018 Dec 11;13(12):e0205052. 30537764doi: 10.1371/journal.pone.0205052.
82坂山 英俊Hidetoshi SakayamaTranscription factor DUO1 generated by neo-functionalization is associated with evolution of sperm differentiation in plantsNat Commun. 2018 Dec 11;9(1):5283. 30538242doi: 10.1038/s41467-018-07728-3.
83佐藤 健吾Kengo SatoConvolutional neural network based on SMILES representation of compounds for detectingBMC Bioinformatics. 2018 Dec 31;19(Suppl 19):526.30598075doi: 10.1186/s12859-018-2523-5.
84曽 超Chao ZengIdentifying sequence features that drive ribosomal association for lncRNABMC Genomics. 2018 Dec 31;19(Suppl 10):906.30598103doi: 10.1186/s12864-018-5275-8.
85佐藤 健吾Kengo SatoA max-margin training of RNA secondary structure prediction integrated with the thermodynamic modelJ Bioinform Comput Biol. 2018 Dec;16(6):1840025.30616476doi: 10.1142/S0219720018400255.
86三浦 収Osamu MiuraRecent lake expansion triggered the adaptive radiation of freshwater snails in the ancient Lake BiwaEvol Lett. 2018 Nov 30;3(1):43-54.30788141doi: 10.1002/evl3.92.
87前田 太郎Taro MaedaGenomic insight into symbiosis-induced insect color change by a facultative bacterial endosymbiont, candidatus rickettsiella viridismBio. 2018 Jun 12;9(3):e00890-18.29895637doi: 10.1128/mBio.00890-18.
88前田 太郎Taro MaedaThe genome of Rhizophagus clarus HR1 reveals a common genetic basis for auxotrophy among arbuscular mycorrhizal fungiBMC Genomics. 2018 Jun 18;19(1):465.29914365doi: 10.1186/s12864-018-4853-0.
89前田 太郎Taro MaedaEvidence of non-tandemly repeated rDNAs and their intragenomic heterogeneity in Rhizophagus irregularisCommun Biol. 2018 Jul 10;1:87.30271968doi: 10.1038/s42003-018-0094-7.
90小川 智久Tomohisa OgawaThe habu genome reveals accelerated evolution of venom protein genes.Sci Rep. 2018 Jul 26;8(1):11300.30050104doi: 10.1038/s41598-018-28749-4.
91Ravinet MarkMark RavinetThe genomic landscape at a late stage of stickleback speciation: High genomic divergencePLoS Genet. 2018 May 23;14(5):e1007358. 29791436doi: 10.1371/journal.pgen.1007358.
92Ravinet MarkMark RavinetSignatures of human-commensalism in the house sparrow genomeProc Biol Sci. 2018 Aug 8;285(1884):20181246. 30089626doi: 10.1098/rspb.2018.1246.
93Zhao RanRan ZhaoDual gene repertoires for larval and adult shells reveal molecules essential for molluscan shell formationMol Biol Evol. 2018 Nov 1;35(11):2751-2761. 30169718doi: 10.1093/molbev/msy172.
94山田 和範Kazunori D YamadaDe novo profile generation based on sequence context specificity with the long short-termBMC Bioinformatics. 2018 Jul 18;19(1):272. 30021530doi: 10.1186/s12859-018-2284-1.
95児玉 明日香Asuka KodamaQTLs maintaining grain fertility under salt stress detected by exome QTL-seq and interval mapping in barleyBreed Sci. 2018 Dec;68(5):561-570.30697117doi: 10.1270/jsbbs.18082.
96小林 和也Kazuya KobayashiHigh expression of the breast cancer susceptibility gene BRCA1 in long-lived termite kingsAging (Albany NY). 2018 Oct 11;10(10):2668-2683.30312170doi: 10.18632/aging.101578.
97瀬川 高弘Takahiro SegawaTrans+C114:D114criptomic analysis of epigenetic modification genes in the termite Reticulitermes speratusNat Commun. 2018 Aug 6;9(1):3094. 30082897doi: 10.1038/s41467-018-05521-w.
98佐藤 賢二Kenji SatouImproving Protein Sequence Classification Performance Using Adjacent and Overlapped Segments on Existing Protein DescriptorsJanuary 2018Journal of Biomedical Science and Engineering 11(06):126-143NULLdoi: 10.4236/jbise.2018.116012.
99佐藤 賢二Kenji SatouImproved Protein Phosphorylation Site Prediction by a New Combination of Feature Set andJanuary 2018Journal of Biomedical Science and Engineering 11(06):144-157NULLdoi: 10.4236/jbise.2018.116013.
100神沼 英里Eli Kaminumaライフサイエンス研究におけるクラウドソーシングの利用と実践デジタルプラクティス Vol.9 No.4 (Oct. 2018)NULLNULL
101西井 かなえKanae NishiiA first genetic map in the genus Streptocarpus generated with RAD sequencing based SNP markersSouth African Journal of Botany, 117, 158-168 - July 2018NULLdoi.org/10.1016/j.sajb.2018.05.009
102矢野健太郎Kentaro YanoTodoFirGene: Developing Transcriptome Resources for Genetic Analysis of Abies sachalinensisPlant Cell Physiol. 2018 Jun 1;59(6):1276-1284.29566239doi: 10.1093/pcp/pcy058.
103矢野健太郎Kentaro YanoTranscriptome of Homoeologous Genes Deduced from the Full-Length cDNA Clones of Common Wheat, Triticum aestivum LJurnal of Genetics & Genomic Sciences.2018;vol-3, issue-1NULLDOI: 10.24966/GGS-2485/100007
104河田雅圭Masakado KawataEvolution of Gustatory Receptor Gene Family Provides Insights into Adaptation to Diverse HostGenome Biol Evol. 2018 Jun 1;10(6):1351-1362.29788112doi: 10.1093/gbe/evy093.
105谷澤 靖洋Yasuhiro TanizawaFructophilic Lactic Acid Bacteria, a Unique Group of Fructose-Fermenting Microbes.Appl Environ Microbiol. 2018 Sep 17;84(19):e01290-18.30054367doi: 10.1128/AEM.01290-18.
106谷澤 靖洋Yasuhiro TanizawaDFAST: a flexible prokaryotic genome annotation pipeline for faster genome publication.Bioinformatics. 2018 Mar 15;34(6):1037-1039. 29106469doi: 10.1093/bioinformatics/btx713.
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