| Supercomputer users in authors list(Japanese) | Supercomputer users in authors list | Title | Journal, Volume, Number, Pages | PMID | DOI |
1 | 石橋 知彦 | Tomohiko Ishibashi | Aryl hydrocarbon receptor is essential for the pathogenesis of pulmonary arterial hypertension | Proc Natl Acad Sci U S A. 2021 Mar 16;118(11):e2023899118. | 33836606 | doi: 10.1073/pnas.2023899118. |
2 | 平瀬 祥太朗, 岩崎 渉 | Shotaro Hirase, Wataru Iwasaki | Integrative genomic phylogeography reveals signs of mitonuclear incompatibility in a natural hybrid goby population | Evolution. 2021 Jan;75(1):176-194. | 33165944 | doi: 10.1111/evo.14120. |
3 | Ravinet Mark, 石川 麻乃 | Mark Ravinet,Asano Ishikawa | Patterns of genomic divergence and introgression between Japanese sticklebackspecies with overlapping breeding habitats. | J Evol Biol. 2021 Jan;34(1):114-127. | 32557887 | doi: 10.1111/jeb.13664. |
4 | 西原 昌宏 | Masahiro Nishihara | Identification and characterization of xanthone biosynthetic genes contributing to the vivid red coloration of red-flowered gentian | The Plant journal : for cell and molecular biology. 2021 Sep;107(6):1711-1723. | 34245606 | doi: 10.1111/tpj.15412 |
5 | 齋藤 裕 | Yutaka Saito | Evotuning protocols for Transformer-based variant effect prediction on multi-domain proteins | Briefings in bioinformatics. 2021 Nov 5;22(6):bbab234. | 34180966 | doi: 10.1093/bib/bbab234 |
6 | 江副 晃洋 | Akihiro Ezoe | Degree of Functional Divergence in Duplicates Is Associated with Distinct Roles in Plant Evolution | Molecular biology and evolution. 2021 Apr 13;38(4):1447-1459. | 33290522 | doi: 10.1093/molbev/msaa302 |
7 | 安井 康夫 | Yasuo Yasui | Targeted amplicon sequencing + next-generation sequencing–based bulked segregant analysis identified genetic loci associated with preharvest sprouting tolerance in common buckwheat (Fagopyrum esculentum) | BMC plant biology. 2021 Jan 6;21(1):18. | 33407135 | doi: 10.1186/s12870-020-02790-w |
8 | 鈴木 啓道 | Hiromichi Suzuki | The transcriptional landscape of Shh medulloblastoma | Nature communications. 2021 Mar 19;12(1):1749. | 33741928 | doi: 10.1038/s41467-021-21883-0 |
9 | 鈴木 郁夫 | Ikuo K Suzuki | 1q21.1 distal copy number variants are associated with cerebral and cognitive alterations in humans | Translational psychiatry. 2021 Mar 22;11(1):182. | 33753722 | doi: 10.1038/s41398-021-01213-0 |
10 | 齋藤 裕 | Yutaka Saito | Rational thermostabilisation of four-helix bundle dimeric de novo proteins | Scientific reports. 2021 Apr 6;11(1):7526. | 33824364 | doi: 10.1038/s41598-021-86952-2 |
11 | 齋藤 裕 | Yutaka Saito | Comparative analysis of the relationship between translation efficiency and sequence features of endogenous proteins in multiple organisms | Genomics. 2021 Jul;113(4):2675-2682. | 34058272 | doi: 10.1016/j.ygeno.2021.05.037 |
12 | 山口 暢俊, 稲垣 宗一 | Nobutoshi Yamaguchi, Soichi Inagaki | H3K27me3 demethylases alter HSP22 and HSP17.6C expression in response to recurring heat in Arabidopsis | Nature communications. 2021 Jun 9;12(1):3480. | 34108473 | doi: 10.1038/s41467-021-23766-w |
13 | 村越 祐美, 高尾 祥丈 | Yumi Murakoshi, Yoshitake Takao | Draft Genome Sequence of Sicyoidochytrium minutum DNA Virus Strain 001 | Microbiology resource announcements. 2021 Jun 10;10(23):e0041821. | 34110234 | doi: 10.1128/MRA.00418-21 |
14 | 小野寺 康之 | Yasuyuki Onodera | A spinach genome assembly with remarkable completeness, and its use for rapid identification of candidate genes for agronomic traits | DNA research : an international journal for rapid publication of reports on genes and genomes. 2021 Jun 25;28(3):dsab004. | 34142133 | doi: 10.1093/dnares/dsab004 |
15 | 宮原 平 | Taira Miyahara | Effect of Transgenic Rootstock Grafting on the Omics Profiles in Tomato | Food safety (Tokyo, Japan). 2021 Jun 25;9(2):32-47. | 34249588 | doi: 10.14252/foodsafetyfscj.D-20-00032 |
16 | 齋藤 裕 | Yutaka Saito | Machine learning approach for discrimination of genotypes based on bright-field cellular images | NPJ systems biology and applications. 2021 Jul 21;7(1):31. | 34290253 | doi: 10.1038/s41540-021-00190-w |
17 | 瀬川 高弘 | Takahiro Segawa | Spatial and Temporal Variations in Pigment and Species Compositions of Snow Algae on Mt. Tateyama in Toyama Prefecture, Japan | Frontiers in plant science. 2021 Jul 5;12:689119. | 34290725 | doi: 10.3389/fpls.2021.689119 |
18 | 平瀬 祥太朗 | Shotaro Hirase | Genomic Evidence for Speciation with Gene Flow in Broadcast Spawning Marine Invertebrates | Molecular biology and evolution. 2021 Oct 27;38(11):4683-4699. | 34311468 | doi: 10.1093/molbev/msab194 |
19 | 松波 雅俊 | Masatoshi Matsunami | Coevolution between MHC class I and Antigen Processing Genes in salamanders. | Molecular biology and evolution. 2021 Oct 27;38(11):5092-5106. | 34375431 | doi: 10.1093/molbev/msab237 |
20 | 高橋 鉄美 | Tetsumi Takahashi | Mapping of quantitative trait loci underlying a magic trait in ongoing ecological speciation | BMC genomics. 2021 Aug 12;22(1):615. | 34384356 | doi: 10.1186/s12864-021-07908-4 |
21 | 瀬川 高弘, 西原 秀典 | Takahiro Segawa, Hidenori Nishihara | Ancient DNA reveals multiple origins and migration waves of extinct Japanese brown bear lineages | Royal Society open science. 2021 Aug 4;8(8):210518. | 34386259 | doi: 10.1098/rsos.210518 |
22 | 川崎 純菜, 堀江 真行 | Junna Kawasaki, Masayuki Horie | Hidden Viral Sequences in Public Sequencing Data and Warning for Future Emerging Diseases | mBio. 2021 Aug 31;12(4):e0163821. | 34399612 | doi: 10.1128/mBio.01638-21 |
23 | 草間 和哉 | Kazuya Kusama | The effect of bta-miR-26b in intrauterine extracellular vesicles on maternal immune system during the implantation period | Biochemical and biophysical research communications. 2021 Oct 8;573:100-106. | 34403805 | doi: 10.1016/j.bbrc.2021.08.019 |
24 | 松前 ひろみ | Hiromi Matsumae | Exploring correlations in genetic and cultural variation across language families in Northeast Asia | Science advances. 2021 Aug 18;7(34):eabd9223. | 34407936 | doi: 10.1126/sciadv.abd9223 |
25 | 石川 麻乃 | Asano Ishikawa | The effect of bta-miR-26b in intrauterine extracellular vesicles on maternal immune system during the implantation period | Biology letters. 2021 Aug;17(8):20210204. | 34428959 | doi: 10.1098/rsbl.2021.0204 |
26 | 湯山 育子 | Ikuko Yuyama | Transcriptome Analysis of Durusdinium Associated with the Transition from Free-Living to Symbiotic | Microorganisms. 2021 Jul 22;9(8):1560. | 34442639 | doi: 10.3390/microorganisms9081560 |
27 | 前野 慎太朗, 谷澤 靖洋, 遠藤 明仁 | Shintaro Maeno, Yasuhiro Tanizawa, Akihito Endo | Oligosaccharide Metabolism and Lipoteichoic Acid Production in Lactobacillus gasseri and Lactobacillus paragasseri | Microorganisms. 2021 Jul 26;9(8):1590. | 34442669 | doi: 10.3390/microorganisms9081590 |
28 | 門田 有希 | Yuki Monden | Transcriptome Analysis Reveals Key Genes Involved in Weevil Resistance in the Hexaploid Sweetpotato | Plants (Basel, Switzerland). 2021 Jul 27;10(8):1535. | 34451581 | doi: 10.3390/plants10081535 |
29 | 向笠 勝貴 | Katsuki Mukaigasa | The developmental hourglass model is applicable to the spinal cord based on single-cell transcriptomes and non-conserved cis-regulatory elements | Development, growth & differentiation. 2021 Sep;63(7):372-391. | 34473348 | doi: 10.1111/dgd.12750 |
30 | 松井 求 | Motomu Matsui | Machine learning-assisted single-cell Raman fingerprinting for in situ and nondestructive classification of prokaryotes | iScience. 2021 Aug 11;24(9):102975. | 34485857 | doi: 10.1016/j.isci.2021.102975 |
31 | 加藤 有己 | Yuki Kato | Mutations in the adenosine deaminase ADAR1 that prevent endogenous Z-RNA editing induce Aicardi-Goutieres syndrome-like encephalopathy | Immunity. 2021 Sep 14;54(9):1976-1988.e7. | 34525338 | doi: 10.1016/j.immuni.2021.08.022 |
32 | 松波 雅俊 | Masatoshi Matsunami | Species divergence and repeated ancient hybridization in a Sulawesian lake system | Journal of evolutionary biology. 2021 Nov;34(11):1767-1780. | 34532915 | doi: 10.1111/jeb.13932 |
33 | 井原 邦夫 | Kunio Ihara | Identification of ksg1 mutation showing long-lived phenotype in fission yeast | Genes to cells : devoted to molecular & cellular mechanisms. 2021 Dec;26(12):967-978. | 34534388 | doi: 10.1111/gtc.12897 |
34 | 一色 真理子 | Mariko Isshiki | Admixture with indigenous people helps local adaptation: admixture-enabled selection in Polynesians | BMC ecology and evolution. 2021 Sep 22;21(1):179. | 34551727 | doi: 10.1186/s12862-021-01900-y |
35 | 西原 秀典 | Hidenori Nishihara | Replacement of owl monkey centromere satellite by a newly evolved variant was a recent and rapid process | Genes to cells : devoted to molecular & cellular mechanisms. 2021 Dec;26(12):979-986. | 34570411 | doi: 10.1111/gtc.12898 |
36 | 草間 和哉, 吉田 佳乃子 | Kazuya Kusama, Kanoko Yoshida | PGE2 and Thrombin Induce Myofibroblast Transdifferentiation via Activin A and CTGF in Endometrial Stromal Cells | Endocrinology. 2021 Dec 1;162(12):bqab207. | 34606582 | doi: 10.1210/endocr/bqab207 |
37 | 小林 正樹 | Masaki J Kobayashi | The genome of Shorea leprosula (Dipterocarpaceae) highlights the ecological relevance of drought in aseasonal tropical rainforests | Communications biology. 2021 Oct 7;4(1):1166. | 34620991 | doi: 10.1038/s42003-021-02682-1 |
38 | 浜口 悠 | Yu Hamaguchi | Impact of human gene annotations on RNA-seq differential expression analysis | BMC genomics. 2021 Oct 8;22(1):730. | 34625021 | doi: 10.1186/s12864-021-08038-7 |
39 | 植松 真章 | Masaaki Uematsu | Raman microscopy-based quantification of the physical properties of intracellular lipids | Communications biology. 2021 Oct 8;4(1):1176. | 34625633 | doi: 10.1038/s42003-021-02679-w |
40 | 佐藤 綾 | Aya Satoh | De novo assembly and annotation of the mangrove cricket genome | BMC research notes. 2021 Oct 9;14(1):387. | 34627387 | doi: 10.1186/s13104-021-05798-z |
41 | 山﨑 曜 | Yo Y Yamasaki | Gudgeon fish with and without genetically determined countershading coexist in heterogeneous littoral environments of an ancient lake | Ecology and evolution. 2021 Aug 31;11(19):13283-13294. | 34646469 | doi: 10.1002/ece3.8050 |
42 | 杉本 竜太 | Ryota Sugimoto | Comprehensive discovery of CRISPR-targeted terminally redundant sequences in the human gut metagenome: Viruses, plasmids, and more | PLoS computational biology. 2021 Oct 21;17(10):e1009428. | 34673779 | doi: 10.1371/journal.pcbi.1009428 |
43 | 中村 保一 | Yasukazu Nakamura | Genome sequencing of the NIES Cyanobacteria collection with a focus on the heterocyst-forming clade. | DNA research : an international journal for rapid publication of reports on genes and genomes. 2021 Oct 11;28(6):dsab024. | 34677568 | doi: 10.1093/dnares/dsab024 |
44 | 安河内 彦輝 | Yoshiki Yasukochi | Upregulation of cathepsin L gene under mild cold conditions in young Japanese male adults | Journal of physiological anthropology. 2021 Oct 22;40(1):16. | 34686211 | doi: 10.1186/s40101-021-00267-9 |
45 | 谷澤 靖洋, 矢倉 勝, 中村 保一 | Yasuhiro Tanizawa, Masaru Yagura, Yasukazu Nakamura | Identification of the sex-determining factor in the liverwort Marchantia polymorpha reveals unique evolution of sex chromosomes in a haploid system. | Current biology : CB. 2021 Dec 20;31(24):5522-5532.e7. | 34735792 | doi: 10.1016/j.cub.2021.10.023 |
46 | 宮澤 清太 | Seita Miyazawa | Studies of Turing pattern formation in zebrafish skin | Philosophical transactions. Series A, Mathematical, physical, and engineering sciences. 2021 Dec 27;379(2213):20200274. | 34743596 | doi: 10.1098/rsta.2020.0274 |
47 | 谷澤 靖洋, 遠野 雅徳 | Yasuhiro Tanizawa, Masanori Tohno | Clostridium zeae sp. nov., isolated from corn silage | International journal of systematic and evolutionary microbiology. 2021 Nov;71(11). | 34748474 | doi: 10.1099/ijsem.0.005088 |
48 | 中川 草 | So Nakagawa | An ancient retroviral RNA element hidden in mammalian genomes and its involvement in co-opted retroviral gene regulation | Retrovirology. 2021 Nov 10;18(1):36. | 34753509 | doi: 10.1186/s12977-021-00580-2 |
49 | Evariste Tshibangu-Kabamba | Evariste Tshibangu-Kabamba | High-Resolution Linear Epitope Mapping of the Receptor Binding Domain of SARS-CoV-2 Spike Protein in COVID-19 mRNA Vaccine Recipients | Microbiology spectrum. 2021 Dec 22;9(3):e0096521. | 34756082 | doi: 10.1128/Spectrum.00965-21 |
50 | 神澤 秀明 | Hideaki Kanzawa-Kiriyama | Triangulation supports agricultural spread of the Transeurasian languages | Nature. 2021 Nov;599(7886):616-621. | 34759322 | doi: 10.1038/s41586-021-04108-8 |
51 | 中尾 亮 | Ryo Nakao | Complete Genome Sequence of Leptospira kobayashii Strain E30, Isolated from Soil in Japan | Microbiology resource announcements. 2021 Nov 11;10(45):e0090721. | 34761960 | doi: 10.1128/MRA.00907-21 |
52 | 加藤 有己 | Yuki Kato | An Aicardi-Goutieres syndrome-causative point mutation in Adar1 gene invokes multi-organ inflammation and late-onset encephalopathy in mice | Journal of immunology (Baltimore, Md. : 1950). 2021 Dec 15;207(12):3016-3027. | 34772697 | doi: 10.4049/jimmunol.2100526 |
53 | 津田 勝利 | Katsutoshi Tsuda | Collection, preservation and distribution of Oryza genetic resources by the National Bioresource Project RICE (NBRP-RICE) | Breeding science. 2021 Jun;71(3):291-298. | 34776736 | doi: 10.1270/jsbbs.21005 |
54 | 下村 晃一郎 | Koichiro Shimomura | Identification of quantitative trait loci for powdery mildew resistance in highly resistant cucumber (Cucumis sativus L.) using ddRAD-seq analysis | Breeding science. 2021 Jun;71(3):326-333. | 34776739 | doi: 10.1270/jsbbs.20141 |
55 | 趙 世涛 | Shitao Zhao | Multi-resBind: a residual network-based multi-label classifier for in vivo RNA binding prediction and preference visualization | BMC bioinformatics. 2021 Nov 15;22(1):554. | 34781902 | doi: 10.1186/s12859-021-04430-y |
56 | 美世 一守 | Kazumori Mise | Undervalued Pseudo-nifH Sequences in Public Databases Distort Metagenomic Insights into Biological Nitrogen Fixers | mSphere. 2021 Dec 22;6(6):e0078521. | 34787447 | doi: 10.1128/msphere.00785-21 |
57 | 水口 洋平, 豊田 敦 | Yohei Minakuchi, Atsushi Toyoda | Genome sequencing of the multicellular alga Astrephomene provides insights into convergent evolution of germ-soma differentiation | Scientific reports. 2021 Nov 22;11(1):22231. | 34811380 | doi: 10.1038/s41598-021-01521-x |
58 | 川本 麻祐子, 河田 雅圭 | Mayuko Kawamoto, Masakado Kawata | Genetic basis of orange spot formation in the guppy (Poecilia reticulata) | BMC ecology and evolution. 2021 Nov 25;21(1):211. | 34823475 | doi: 10.1186/s12862-021-01942-2 |
59 | 佐藤 健吾 | Kengo Sato | A Max-Margin Model for Predicting Residue-Base Contacts in Protein-RNA Interactions | Life (Basel, Switzerland). 2021 Oct 25;11(11):1135. | 34833011 | doi: 10.3390/life11111135 |
60 | Vo Phuoc Tuan, 矢原 耕史 | Vo Phuoc Tuan, Koji Yahara | Genome-wide association study of gastric cancer- and duodenal ulcer-derived Helicobacter pylori strains reveals discriminatory genetic variations and novel oncoprotein candidates | Microbial genomics. 2021 Nov;7(11):000680. | 34846284 | doi: 10.1099/mgen.0.000680 |
61 | 有泉 亨 | Tohru Ariizumi | Organelle genome assembly uncovers the dynamic genome reorganization and cytoplasmic male sterility associated genes in tomato | Horticulture research. 2021 Dec 1;8(1):250. | 34848681 | doi: 10.1038/s41438-021-00676-y |
62 | 渡邊 美穂 | Miho Watanabe | Mariniplasma anaerobium gen. nov., sp. nov., a novel anaerobic marine mollicute, and proposal of three novel genera to reclassify members of Acholeplasma clusters II-IV | International journal of systematic and evolutionary microbiology. 2021 Dec;71(12). | 34874244 | doi: 10.1099/ijsem.0.005138 |
63 | 新里 宙也 | Chuya Shinzato | Whole-Genome Sequencing Highlights Conservative Genomic Strategies of a Stress-Tolerant, Long-Lived Scleractinian Coral, Porites australiensis Vaughan, 1918 | Genome biology and evolution. 2021 Dec 1;13(12):evab270. | 34878117 | doi: 10.1093/gbe/evab270 |
64 | 遠野 雅徳, 谷澤 靖洋 | Masanori Tohno, Yasuhiro Tanizawa | Lentilactobacillus fungorum sp. nov., isolated from spent mushroom substrates | International journal of systematic and evolutionary microbiology. 2021 Dec;71(12). | 34913426 | doi: 10.1099/ijsem.0.005184 |
65 | 大島 一里 | Kazusato Ohshima | Genomic Epidemiology and Evolution of Scallion Mosaic Potyvirus From Asymptomatic Wild Japanese Garlic | Frontiers in microbiology. 2021 Dec 8;12:789596. | 34956155 | doi: 10.3389/fmicb.2021.789596 |
66 | 武藤 吉徳 | Yoshinori Muto | Neuropsychiatric Adverse Events of Montelukast: An Analysis of Real-World Datasets and drug−gene Interaction Network | Frontiers in pharmacology. 2021 Dec 20;12:764279. | 34987393 | doi: 10.3389/fphar.2021.764279 |
67 | 松尾 俊彦 | Toshihiko Matsuo | Whole Exome-Sequencing of Pooled Genomic DNA Samples to Detect Quantitative Trait Loci in Esotropia and Exotropia of Strabismus in Japanese | Life (Basel, Switzerland). 2021 Dec 27;12(1):41. | 35054434 | doi: 10.3390/life12010041 |
68 | 花野 滋 | Shigeru Hanano | Development of the Binary Vector pTACAtg1 for Stable Gene Expression in Plant; Reduction of Gene Silencing in Transgenic Plants Carrying the Target Gene with Long Flanking Sequences | Plant biotechnology (Tokyo, Japan). 2021 Dec 25;38(4):391-400. | 35087303 | doi: 10.5511/plantbiotechnology.21.0823a |
69 | 田崎 啓介 | Keisuke Tasaki | Identification and characterization of xanthone biosynthetic genes contributing to the vivid red coloration of red-flowered gentian | The Plant journal : for cell and molecular biology. 2021 Sep;107(6):1711-1723. | 34245606 | doi: 10.1111/tpj.15412 |
70 | 長﨑 正朗 | Masao Nagasaki | Practical guide for managing large-scale human genome data in research | Journal of human genetics. 2021 Jan;66(1):39-52. | 33097812 | doi: 10.1038/s10038-020-00862-1 |
71 | 丹野 広貴 | Hiroki Tanno | Characterization of fructooligosaccharide metabolism and fructooligosaccharide-degrading enzymes in human commensal butyrate producers | Gut microbes. 2021 Jan-Dec;13(1):1-20. | 33439065 | doi: 10.1080/19490976.2020.1869503 |
72 | 河合 洋介 | Yosuke Kawai | Genome-wide SNP data of Izumo and Makurazaki populations support inner-dual structure model for origin of Yamato people | Journal of human genetics. 2021 Jul;66(7):681-687. | 33495571 | doi: 10.1038/s10038-020-00898-3 |
73 | 堀江 真行 | Masayuki Horie | Identification of novel avian and mammalian deltaviruses provides new insights into deltavirus evolution | Virus evolution. 2021 Feb 12;7(1):veab003. | 33614159 | doi: 10.1093/ve/veab003 |
74 | 和智 仲是 | Nakatada Wachi | Genomic population structure of sympatric sexual and asexual populations in a parasitic wasp, Meteorus pulchricornis (Hymenoptera: Braconidae), inferred from six hundred single-nucleotide polymorphism loci | Molecular ecology. 2021 Apr;30(7):1612-1623. | 33634920 | doi: 10.1111/mec.15834 |
75 | 西田 奈央 | Nao Nishida | Importance of HBsAg recognition by HLA molecules as revealed by responsiveness to different hepatitis B vaccines | Scientific reports. 2021 Mar 2;11(1):3703. | 33654122 | doi: 10.1038/s41598-021-82986-8 |
76 | 谷澤 靖洋, 津田 勝利, 中村 保一 | Yasuhiro Tanizawa, Katsutoshi Tsuda, Yasukazu Nakamura | OryzaGenome2.1: Database of Diverse Genotypes in Wild Oryza Species | Rice (New York, N.Y.). 2021 Mar 4;14(1):24. | 33661371 | doi: 10.1186/s12284-021-00468-x |
77 | 竹崎 直子 | Naoko Takezaki | Resolving the Early Divergence Pattern of Teleost Fish Using Genome-Scale Data | Genome biology and evolution. 2021 May 7;13(5):evab052. | 33739405 | doi: 10.1093/gbe/evab052 |
78 | 川久保 修佑 | Shusuke Kawakubo | Genomic analysis of the brassica pathogen turnip mosaic potyvirus reveals its spread along the former trade routes of the Silk Road | Proceedings of the National Academy of Sciences of the United States of America. 2021 Mar 23;118(12):e2021221118. | 33741737 | doi: 10.1073/pnas.2021221118 |
79 | 殿崎 薫 | Kaoru Tonosaki | Mutation of the imprinted gene OsEMF2a induces autonomous endosperm development and delayed cellularization in rice | The Plant cell. 2021 Mar 22;33(1):85-103. | 33751094 | doi: 10.1093/plcell/koaa006 |
80 | 松尾 芳隆 | Yoshitaka Matsuo | The ribosome collision sensor Hel2 functions as preventive quality control in the secretory pathway | Cell reports. 2021 Mar 23;34(12):108877. | 33761353 | doi: 10.1016/j.celrep.2021.108877 |
81 | 矢原 耕史 | Koji Yahara | Emergence and evolution of antimicrobial resistance genes and mutations in Neisseria gonorrhoeae | Genome medicine. 2021 Mar 30;13(1):51. | 33785063 | doi: 10.1186/s13073-021-00860-8 |
82 | 吉武 和敏 | Kazutoshi Yoshitake | Estimation of tuna population by the improved analytical pipeline of unique molecular identifier-assisted HaCeD-Seq (haplotype count from eDNA) | Scientific reports. 2021 Apr 12;11(1):7031. | 33846364 | doi: 10.1038/s41598-021-86190-6 |
83 | 西井 かなえ | Kanae Nishii | Mix and match: Patchwork domain evolution of the land plant-specific Ca2+-permeable mechanosensitive channel MCA | PloS one. 2021 Apr 15;16(4):e0249735. | 33857196 | doi: 10.1371/journal.pone.0249735 |
84 | 前野 慎太朗, 遠藤 明仁, 中条 聡 | Shintaro Maeno, Akihito Endo | Niche-specific adaptation of Lactobacillus helveticus strains isolated from malt whisky and dairy fermentations | Microbial genomics. 2021 Apr;7(4):000560. | 33900907 | doi: 10.1099/mgen.0.000560 |
85 | 加藤 有己 | Yuki Kato | RNA editing at a limited number of sites is sufficient to prevent MDA5 activation in the mouse brain | PLoS genetics. 2021 May 13;17(5):e1009516. | 33983932 | doi: 10.1371/journal.pgen.1009516 |
86 | 坊農 秀雅 | Hidemasa Bono | De novo transcriptome analysis for examination of the nutrition metabolic system related to the evolutionary process through which stick insects gain the ability of flight (Phasmatodea). | BMC research notes. 2021 May 13;14(1):182. | 33985569 | doi: 10.1186/s13104-021-05600-0 |
87 | 川崎 純菜, 堀江 真行 | Junna Kawasaki, Masayuki Horie | 100-My history of bornavirus infections hidden in vertebrate genomes | Proceedings of the National Academy of Sciences of the United States of America. 2021 May 18;118(20):e2026235118. | 33990470 | doi: 10.1073/pnas.2026235118 |
88 | 本道 栄一 | Eiichi Hondo | Viral-derived DNA invasion and individual variation in an Indonesian population of large flying fox Pteropus vampyrus | The Journal of veterinary medical science. 2021 Jul 2;83(7):1068-1074. | 33994419 | doi: 10.1292/jvms.21-0115 |
89 | 花田 耕介 | Kousuke Hanada | Positive selective sweeps of epigenetic mutations regulating specialized metabolites in plants | Genome research. 2021 Jun;31(6):1060-1068. | 34006571 | doi: 10.1101/gr.271726.120 |
90 | 水口 洋平, 豊田 敦 | Yohei Minakuchi, Atsushi Toyoda | Three genomes in the algal genus Volvox reveal the fate of a haploid sex-determining region after a transition to homothallism | Proceedings of the National Academy of Sciences of the United States of America. 2021 May 25;118(21):e2100712118. | 34011609 | doi: 10.1073/pnas.2100712118 |
91 | 石神 宥真 | Yuma Ishigami | A single m6A modification in U6 snRNA diversifies exon sequence at the 5' splice site | Nature communications. 2021 May 28;12(1):3244. | 34050143 | doi: 10.1038/s41467-021-23457-6 |
92 | 中川 草 | So Nakagawa | SARS-CoV-2 spike L452R variant evades cellular immunity and increases infectivity | Cell host & microbe. 2021 Jul 14;29(7):1124-1136.e11. | 34171266 | doi: 10.1016/j.chom.2021.06.006 |
93 | 岩切 淳一 | Junichi Iwakiri | m6A modification of HSATIII lncRNAs regulates temperature-dependent splicing | The EMBO journal. 2021 Aug 2;40(15):e107976. | 34184765 | doi: 10.15252/embj.2021107976 |
94 | 平野 雅規 | Masaki Hirano | Newly established patient-derived organoid model of intracranial meningioma | Neuro-oncology. 2021 Nov 2;23(11):1936-1948. | 34214169 | doi: 10.1093/neuonc/noab155 |
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119 | 水口 洋平, 豊田 敦 | Yohei Minakuchi, Atsushi Toyoda | Comparative analysis using the draft genome sequence of California poppy (Eschscholzia californica) for exploring the candidate genes involved in benzylisoquinoline alkaloid biosynthesis | Bioscience, biotechnology, and biochemistry. 2021 Mar 24;85(4):851-859. | 33589920 | doi: 10.1093/bbb/zbaa091 |
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122 | 渡部 裕介, 大橋 順 | Yusuke Watanabe, Jun Ohashi | Prefecture-level population structure of the Japanese based on SNP genotypes of 11,069 individuals | Journal of human genetics. 2021 Apr;66(4):431-437. | 33051579 | doi: 10.1038/s10038-020-00847-0 |
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125 | 西村 瑠佳 | Luca Nishimura | Identification of ancient viruses from metagenomic data of the Jomon people | Journal of human genetics. 2021 Mar;66(3):287-296. | 32994538 | doi: 10.1038/s10038-020-00841-6 |
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127 | 金森 駿介, 河田 雅圭 | Shunsuke Kanamori, Masakado Kawata | Detection of genes positively selected in Cuban Anolis lizards that naturally inhabit hot and open areas, and currently thrive in urban areas | Ecology and evolution. 2021 Jan 29;11(4):1719-1728. | 33613999 | doi: 10.1002/ece3.7161 |
128 | 木村 敦 | Atsushi P Kimura | A dual enhancer-silencer element, DES-K16, in mouse spermatocyte-derived GC-2spd(ts) cells | Biochemical and biophysical research communications. 2021 Jan 1;534:1007-1012. | 33121685 | doi: 10.1016/j.bbrc.2020.10.049 |
129 | 江上 陸, 黒田 真也 | Riku Egami, Shinya Kuroda | Trans-omic analysis reveals obesity-associated dysregulation of inter-organ metabolic cycles between the liver and skeletal muscle | iScience. 2021 Feb 20;24(3):102217. | 33748705 | doi: 10.1016/j.isci.2021.102217 |
130 | 北住 愛 | Ai Kitazumi | Novel and transgressive salinity tolerance in recombinant inbred lines of rice created by physiological coupling-uncoupling and network rewiring effects | Frontiers in plant science. 2021 Feb 23;12:615277. | 33708229 | doi: 10.3389/fpls.2021.615277 |
131 | 平林 茂樹 | Shigeki Hirabayashi | APOBEC3B is preferentially expressed at the G2/M phase of cell cycle | Biochemical and biophysical research communications. 2021 Mar 26;546:178-184. | 33592502 | doi: 10.1016/j.bbrc.2021.02.008 |
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138 | 中川 草 | So Nakagawa | Diverse mosquito-specific flaviviruses in the Bolivian Amazon basin | The Journal of general virology. 2021 Mar;102(3). | 33416463 | doi: 10.1099/jgv.0.001518 |
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144 | 千頭 康彦 | Yasuhiko Chikami | Oral RNAi of diap1 results in rapid reduction of damage to potatoes in Henosepilachna vigintioctopunctata | Journal of Pest Science volume 94, pages505–515 (2021) | NULL | doi: 10.1007/s10340-020-01276-w |
145 | 松波 雅俊 | Masatoshi Matsunami | Transcriptomic Changes in Hot Spring Frog Tadpoles (Buergeria otai) in Response to Heat Stress | Frontiers in Ecology and Evolution, October 2021, Volume 9, Article 706887, Pages1-9 | NULL | doi: 10.3389/fevo.2021.706887 |
146 | 山田 和範, 林 方州 | Kazunori D YAMADA, Fangzhou LIN | Developing a novel recurrent neural network architecture with fewer parameters and good learning performance | Interdisciplinary Information Sciences Vol. 27, No. 1 (2021) 25–40 | NULL | doi: 10.4036/iis.2020.R.01 |
147 | 安田 仁奈 | Nina Yasuda | Phylogeography of Blue Corals (Genus Heliopora) Across the Indo-West Pacific | Frontiers in Marine Science, August 2021, Volume 8, Article 714662 | NULL | doi: 10.3389/fmars.2021.714662 |
148 | 佐藤 晋也 | Shinya Sato | Inheritance of spheroid body and plastid in the raphid diatom Epithemia (Bacillariophyta) during sexual reproduction | Phycologia, Volume 60, 2021-Issue 3,Pages 265-273 | NULL | doi: 10.1080/00318884.2021.1909399 |
149 | 林 方州 | Fangzhou Lin | An Effective Convolutional Neural Network for Visualized Understanding Transboundary Air Pollution Based on Himawari-8 Satellite Images | IEEE Geoscience and Remote Sensing Letters ( Volume: 19),13 August 2021 | NULL | doi: 10.1109/LGRS.2021.3102939 |
150 | 白石 允梓 | Masashi Shiraishi | Influence of Labor Conditions and Interaction Among Individuals on Circadian Activity Rhythms in the Ant Camponotus Japonicus | Journal of Robotics and Mechatronics Vol.33 No.3, 2021, p.582-589 | NULL | doi: 10.20965/jrm.2021.p0582 |
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152 | 下村 晃一郎 | Koichiro Shimomura | Quantitative trait locus analysis of cucumber fruit texture using double‐digest restriction‐site‐associated DNA sequencing | Euphytica volume 217, Article number: 107 (2021) | NULL | doi: 10.1007/s10681-021-02830-y |
153 | 鳥丸 猛 | Torimaru Takeshi | ヒメアオキの花成関連性遺伝子領域の探索 | 中部森林研究 巻 69, p.1-4, 発行日 2021-05-30 | NULL | doi: 10.18999/chufr.69.1 |
154 | 鈴木 雅大 | Masahiro Suzuki | A new flattened species of Gracilariopsis (Gracilariales, Rhodophyta) from Japan | Phycologia, Volume 60, 2021-Issue 2, 158-163 | NULL | doi: 10.1080/00318884.2021.1880755 |
155 | 鈴木 雅大 | Masahiro Suzuki | Morpho-anatomical and molecular reassessments of Rhodymenia prostrata (Rhodymeniaceae, Rhodophyta) from Japan support the recognition of Halopeltis tanakae nom. nov | Phycologia, Volume 60, 2021 - Issue 6, Pages 582-588 | NULL | doi: 10.1080/00318884.2021.1959743 |
156 | 鈴木 雅大 | Masahiro Suzuki | Fredericqia (Phyllophoraceae, Rhodophyta) in the northwestern Pacific, with the description of Fredericqia chiharae sp. nov. | Phycologia, Volume 60, 2021 - Issue 3, Pages 210-214 | NULL | doi: 10.1080/00318884.2021.1892399 |
157 | 鈴木 雅大 | Masahiro Suzuki | A new species of the genus Sheathia (Batrachospermaceae, Rhodophyta) from Japan | Phycologia, Volume 60, 2021 - Issue 4, Pages 368-374 | NULL | doi: 10.1080/00318884.2021.1946643 |
158 | 鈴木 雅大 | Masahiro Suzuki | First record of Sheathia abscondita Stancheva, Sheath & M.L.Vis (Batrachospermaceae, Rhodophyta) from Japan. | Bull. Natl. Mus. Nat. Sci., Ser. B, 47(4), pp. 175–182, November 22, 2021 | NULL | doi: 10.50826/bnmnsbot.47.4_175 |
159 | 湯山 育子 | Ikuko Yuyama | Application of RNA Interference Technology to Acroporid Juvenile Corals | Front. Mar. Sci., 09 August 2021 | NULL | doi: 10.3389/fmars.2021.688876 |
160 | 齋藤 裕 | Yutaka Saito | Machine-learning-guided library design cycle for directed evolution of enzymes: the effects of training data composition on sequence space exploration | ACS Catal. 2021, 11, 23, 14615–14624 | NULL | doi: 10.1021/acscatal.1c03753 |
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162 | 下野 嘉子 | Yoshiko Shimono | Revegetation in Japan overlooks geographical genetic structure of native Artemisia indica var. maximowiczii populations | Restoration Ecolog 2021 | NULL | doi.org/10.1111/rec.13567 |
163 | 神澤 秀明 | Hideaki Kanzawa-Kiriyama | Ancient genomes from the initial Jomon period: new insights into the genetic history of the Japanese archipelago | Anthropological Science, Vol. 129(1), 13–22, 2021 | NULL | doi: 10.1537/ase.2012132 |
164 | 佐藤 賢二 | Kenji Satou | The Enrichment of Texture Information to Improve Optical Flow for Silhouette Image | (IJACSA) International Journal of Advanced Computer Science and Applications, Vol. 12, No. 2, 2021 | NULL | doi: 10.14569/IJACSA.2021.0120253 |
165 | 小林 光智衣 | Michie Kobayashi | Insertion of a transposable element in Less Shattering1 (SvLes1) gene is not always involved in foxtail millet (Setaria italica) domestication | Genetic Resources and Crop Evolution volume 68, pages 2923–2930 (2021) | NULL | doi: 10.1007/s10722-021-01165-w |
166 | 坂山 英俊 | HidetoshiSakayama | New distributional records, taxonomy, morphology, and genetic variations of the endangered brackish-water species Lamprothamnium succinctum (Charales, Charophyceae) in Japan | Journal of Asia-Pacific Biodiversity, Volume 14, Issue 1, 1 March 2021, Pages 15-22 | NULL | doi: 10.1016/j.japb.2020.09.005 |
167 | 毛利 公一, 福永 津嵩 | Koichi Mori, Tsukasa Fukunaga | MotiMul: A significant discriminative sequence motif discovery algorithm with multiple testing correction | IEEE, 13 January 2021 | NULL | doi: 10.1109/BIBM49941.2020.9313598 |