| Supercomputer users in authors list(Japanese) | Supercomputer users in authors list | Title | Journal, Volume, Number, Pages | PMID | DOI |
| 1 | 墨谷 暢子 | Nobuko Sumiya | Coordination mechanism of cell and cyanelle division in the glaucophyte alga Cyanophora sudae | Protoplasma. 2022 Jul;259(4):855-867. | 34553240 | doi: 10.1007/s00709-021-01704-3 |
| 2 | 佐藤 健吾 | Kengo Sato | Prediction of RNA secondary structure including pseudoknots for long sequences | Briefings in bioinformatics. 2022 Jan 17;23(1):bbab395. | 34601552 | doi: 10.1093/bib/bbab395 |
| 3 | 竹中 康浩 | Yasuhiro Takenaka | Prolonged disturbance of proteostasis induces cellular senescence via temporal mitochondrial dysfunction and subsequent mitochondrial accumulation in human fibroblasts | The FEBS journal. 2022 Mar;289(6):1650-1667. | 34689411 | doi: 10.1111/febs.16249 |
| 4 | Yassouf Mhd Yousuf | Mhd Yousuf Yassouf | Biphasic effect of mechanical stress on lymphocyte activation | Journal of cellular physiology. 2022 Feb;237(2):1521-1531. | 34724217 | doi: 10.1002/jcp.30623 |
| 5 | イワサキ タケシ | Takeshi Iwasaki | Merkel cell polyomavirus-negative Merkel cell carcinoma is associated with JAK-STAT and MEK-ERK pathway activation. | Cancer Sci. 2022 Jan; 113(1): 251-260. | 34724284 | doi: 1111/cas.15187 |
| 6 | 小笠原 理 | Ogasawara Osamu | DNA Data Bank of Japan (DDBJ) update report 2021. | Nucleic Acids Res. 2022 Jan 07; 50(D1): D102-D105. | 34751405 | doi: 1093/nar/gkab995 |
| 7 | 高田 豊行, 近藤 伸二 | Toyoyuki Takada, Shinji Kondo | MoG+: a database of genomic variations across three mouse subspecies for biomedical research | Mammalian genome : official journal of the International Mammalian Genome Society. 2022 Mar;33(1):31-43. | 34782917 | doi: 10.1007/s00335-021-09933-w |
| 8 | 小野 肇 | Hajime Ono | Functional characterization of an olfactory receptor in the Oriental fruit fly, Bactrocera dorsalis, that responds to eugenol and isoeugenol | Comparative biochemistry and physiology. Part B, Biochemistry & molecular biology. 2022 Feb-Mar;258:110696. | 34800681 | doi: 10.1016/j.cbpb.2021.110696 |
| 9 | 伊達 悠貴 | Yuki Date | Runx3 is required for oncogenic Myc upregulation in p53-deficient osteosarcoma. | Oncogene. 2022 Jan; 41(5): 683-691. | 34803166 | doi: 1038/s41388-021-02120-w |
| 10 | 市原 知哉 | kazuya ichihara | Identification and characterization of novel proteins associated with CHD4. | Genes Cells. 2022 Jan; 27(1): 61-71. | 34897913 | doi: 1111/gtc.12909 |
| 11 | 加藤 裕之 | Hiroyuki Kato | MNX1-HNF1B axis is ihttps://pubmed.ncbi.nlm.nih.gov/34953915/ndispensable for intraductal papillary mucinous neoplasm lineages | Gastroenterology. 2022 Apr;162(4):1272-1287.e16. | 34953915 | doi: 10.1053/j.gastro.2021.12.254 |
| 12 | 中川 草 | So Nakagawa | The SARS-CoV-2 Lambda variant exhibits enhanced infectivity and immune resistance | Cell reports. 2022 Jan 11;38(2):110218. | 34968415 | doi: 10.1016/j.celrep.2021.110218 |
| 13 | 今野 直輝 | Naoki Konno | Deep distributed computing to reconstruct extremely large lineage trees. | Nature biotechnology. 2022 Apr;40(4):566-575. | 34992246 | doi: 10.1038/s41587-021-01111-2 |
| 14 | 阿部 陽 | Akira Abe | Recombinant inbred lines and next-generation sequencing enable rapid identification of candidate genes involved in morphological and agronomic traits in foxtail millet. | Sci Rep. 2022 Jan 07; 12(1): 218. | 34997038 | doi: 1038/s41598-021-04012-1 |
| 15 | 川上 聖司 | Satoshi Kawakami | mTOR-AKT Signaling in Cellular Clock Resetting Triggered by Osmotic Stress. | Antioxid Redox Signal. 2022 Oct; 37(10-12): 631-646. | 35018792 | doi: 1089/ars.2021.0059 |
| 16 | 松波 雅俊 | Masatoshi Matsunami | Genomic and transcriptomic analyses of the subterranean termite Reticulitermes speratus: gene duplication facilitates social evolution | Proceedings of the National Academy of Sciences of the United States of America. 2022 Jan 18;119(3):e2110361119. | 35042774 | doi: 10.1073/pnas.2110361119 |
| 17 | 福永 津嵩 | Tsukasa Fukunaga | Inverse Potts model improves accuracy of phylogenetic profiling | Bioinformatics (Oxford, England). 2022 Jan 21;38(7):1794-1800. | 35060594 | doi: 10.1093/bioinformatics/btac034 |
| 18 | 鄒 兆南, 沖 真弥 | Zhaonan Zou, Shinya Oki | Epigenetic landscape of drug responses revealed through large-scale ChIP-seq data analyses | BMC bioinformatics. 2022 Jan 24;23(1):51. | 35073843 | doi: 10.1186/s12859-022-04571-8 |
| 19 | 石井 悠, 丸山 真一朗 | Yuu Ishii, Shinichiro Maruyama | Gene expression alterations from reversible to irreversible stages during coral metamorphosis | Zoological letters. 2022 Jan 25;8(1):4. | 35078542 | doi: 10.1186/s40851-022-00187-1 |
| 20 | 前野 慎太朗 | Shintaro Maeno | 16S rRNA gene sequence diversity in Faecalibacterium prausnitzii-complex taxa has marked impacts on quantitative analysis. | FEMS Microbiol Ecol. 2022 Feb 10; 98(1): fiac004. | 35090008 | doi: 1093/femsec/fiac004 |
| 21 | 仮屋園 遼 | Ryo Kariyazono | Identification of genome-wide distribution of cyanobacterial group 2 sigma factor SigE accountable for its regulon | The Plant journal : for cell and molecular biology. 2022 Apr;110(2):548-561. | 35092706 | doi: 10.1111/tpj.15687 |
| 22 | 川島 武士, 吉田 真明, 濱田 麻友子 | Takeshi Kawashima, Masa-Aki Yoshida, Mayuko Hamada | Observing Phylum-Level Metazoan Diversity by Environmental DNA Analysis at the Ushimado Area in the Seto Inland Sea | Zoological science. 2022 Feb;39(1):157-165. | 35107003 | doi: 10.2108/zs210073 |
| 23 | 武藤 吉徳 | Yoshinori Muto | Complete Genome Sequences of Three Phocaeicola vulgatus Strains Isolated from a Healthy Japanese Individual | Microbiology resource announcements. 2022 Feb 17;11(2):e0112421. | 35112912 | doi: 10.1128/mra.01124-21 |
| 24 | 伊達 悠貴 | Yuki Date | Oncogenic Runx1-Myc axis in p53-deficient thymic lymphoma. | Gene. 2022 Apr 20; 819: 146234. | 35114276 | doi: 1016/j.gene.2022.146234 |
| 25 | 松波 雅俊 | Masatoshi Matsunami | Gene Structure Analysis of Chemokines and Their Receptors in Allotetraploid Frog, Xenopus laevis | Frontiers in genetics. 2022 Jan 20;12:787979. | 35126458 | doi: 10.3389/fgene.2021.787979 |
| 26 | 茂木 朋貴 | Tomoki Motegi | Anti-CCR4 treatment depletes regulatory T cells and leads to clinical activity in a canine model of advanced prostate cancer | Journal for immunotherapy of cancer. 2022 Feb;10(2):e003731. | 35131860 | doi: 10.1136/jitc-2021-003731 |
| 27 | 佐久間 敦丈 | Atsuhiro Sakuma | A transcriptomic reevaluation of the accessory olfactory organ in Bichir (Polypterus senegalus) | Zoological letters. 2022 Feb 8;8(1):5. | 35135614 | doi: 10.1186/s40851-022-00189-z |
| 28 | 茂木 朋貴 | Tomoki Motegi | Dystrophin-deficient muscular dystrophy in a Toy Poodle with a single base pair insertion in exon 45 of the Duchenne muscular dystrophy gene | The Journal of veterinary medical science. 2022 Apr 13;84(4):502-506. | 35135937 | doi: 10.1292/jvms.21-0504 |
| 29 | 藤井 雅史 | Masashi Fujii | Four features of temporal patterns characterize similarity among individuals and molecules by glucose ingestion in humans | NPJ systems biology and applications. 2022 Feb 8;8(1):6. | 35136093 | doi: 10.1038/s41540-022-00213-0 |
| 30 | 五味 良太 | Ryota Gomi | Emergence of rare carbapenemases (FRI, GES-5, IMI, SFC and SFH-1) in Enterobacterales isolated from surface waters in Japan | The Journal of antimicrobial chemotherapy. 2022 Apr 27;77(5):1237-1246. | 35137119 | doi: 10.1093/jac/dkac029 |
| 31 | 小木曽 映里 | Eri Ogiso-Tanaka | De Novo Genome Assembly of Stinkhorn Mushroom Clathrus columnatus (Basidiomycota, Fungi) Using Illumina and Nanopore Sequencing Data | Microbiology resource announcements. 2022 Feb 17;11(2):e0102621. | 35142541 | doi: 10.1128/mra.01026-21 |
| 32 | 坂山 英俊 | Hidetoshi Sakayama | Discovery of ultrafast myosin, its amino acid sequence, and structural features | Proceedings of the National Academy of Sciences of the United States of America. 2022 Feb 22;119(8):e2120962119. | 35173046 | doi: 10.1073/pnas.2120962119 |
| 33 | 新里 宙也 | Chuya Shinzato | Larval transcriptomic responses of a stony coral, Acropora tenuis, during initial contact with the native symbiont, Symbiodinium microadriaticum | Sci Rep. 2022 Feb 21;12(1):2854. | 35190599 | doi: 10.1038/s41598-022-06822-3 |
| 34 | 有泉 亨 | Tohru Ariizumi | orf137 triggers cytoplasmic male sterility in tomato. | Plant Physiol. 2022 Jun 01; 189(2): 465-468. | 35212743 | doi: 1093/plphys/kiac082 |
| 35 | 黒田 真也 | Shinya Kuroda | Multi-omics-based label-free metabolic flux inference reveals obesity-associated dysregulatory mechanisms in liver glucose metabolism. | iScience. 2022 Feb 4;25(2):103787. | 35243212 | doi: 10.1016/j.isci.2022.103787 |
| 36 | 小林 光智衣 | Michie Kobayashi | A jacalin-like lectin domain-containing protein of Sclerospora graminicola acts as an apoplastic virulence effector in plant-oomycete interactions | Molecular plant pathology. 2022 Jun;23(6):845-854. | 35257477 | doi: 10.1111/mpp.13197 |
| 37 | 石下 聡, 郷 康広 | Satoshi Ishishita, Yasuhiro Go | Uterus-specific transcriptional regulation underlies eggshell pigment production in Japanese quail | PloS one. 2022 Mar 10;17(3):e0265008. | 35271636 | doi: 10.1371/journal.pone.0265008 |
| 38 | 茂木 朋貴 | Tomoki Motegi | mRNA sequencing analysis and growth inhibitory effects of palbociclib on cell lines from canine histiocytic proliferative disorders. | Vet Comp Oncol. 2022 Sep; 20(3): 587-601. | 35278028 | doi: 1111/vco.12812 |
| 39 | 高木 亙 | Wataru Takagi | Molecular mechanism of nutrient uptake in developing embryos of oviparous cloudy catshark (Scyliorhinus torazame) | PloS one. 2022 Mar 15;17(3):e0265428. | 35290397 | doi: 10.1371/journal.pone.0265428 |
| 40 | 吉田 真明 | Masa-Aki Yoshida | Gut microbiota analysis of Blenniidae fishes including an algae-eating fish and clear boundary formation among isolated Vibrio strains | Scientific reports. 2022 Mar 17;12(1):4642. | 35301363 | doi: 10.1038/s41598-022-08511-7 |
| 41 | 笠井 淳司, 田沼 将人, 笠井 淳司, 奥野 浩行 | Atsushi Kasai, Masato Tanuma, Atsushi Kasai, Hiroyuki Okuno | Claustrum mediates bidirectional and reversible control of stress-induced anxiety responses | Science advances. 2022 Mar 18;8(11):eabi6375. | 35302853 | doi: 10.1126/sciadv.abi6375 |
| 42 | 比嘉 綱己 | Tsunaki Higa | Spatiotemporal reprogramming of differentiated cells underlies regeneration and neoplasia in the intestinal epithelium | Nature communications. 2022 Mar 21;13(1):1500. | 35314700 | doi: 10.1038/s41467-022-29165-z |
| 43 | 村上 匠, 瀬川 高弘 | Takumi Murakami, Takahiro Segawa | Metagenomics reveals global-scale contrasts in nitrogen cycling and cyanobacterial light harvesting mechanisms in glacier cryoconite | Microbiome. 2022 Mar 23;10(1):50. | 35317857 | doi: 10.1186/s40168-022-01238-7 |
| 44 | 阿部 陽 | Akira Abe | High-performance pipeline for MutMap and QTL-seq. | PeerJ. 2022; 10: e13170. | 35321412 | doi: 7717/peerj.13170 |
| 45 | 森 宣仁 | Nobuhito Mori | Potential Metabolite Markers for Pancreatic Cancer Identified by Metabolomic Analysis of Induced Cancer-Associated Fibroblasts | Cancers. 2022 Mar 8;14(6):1375. | 35326527 | doi: 10.3390/cancers14061375 |
| 46 | 田路 矩之, 郷 康広 | Noriyuki Toji, Yasuhiro Go | Nicotinic acetylcholine receptors in a songbird brain. | J Comp Neurol. 2022 Aug; 530(11): 1966-1991. | 35344610 | doi: 1002/cne.25314 |
| 47 | 市村 和也 | Kazuya Ichimura | Simultaneous mutations in SMN1 and SUMM2 fully suppress the dwarf and autoimmune phenotypes of Arabidopsis mpk4 mutant. | Plant Signal Behav. 2022 Dec 31; 17(1): 2046412. | 35350957 | doi: 1080/15592324.2022.2046412 |
| 48 | 火原 日美子 | Himiko Hibara | ATTED-II v11: A Plant Gene Coexpression Database Using a Sample Balancing Technique by Subagging of Principal Components. | Plant Cell Physiol. 2022 Jun 15; 63(6): 869-881. | 35353884 | doi: 1093/pcp/pcac041 |
| 49 | 吉田 光範 | Mitsunori Yoshida | Complete Genome Sequence of Mycobacterium fortuitum subsp. fortuitum JCM 6387, a Type Strain of Human-Pathogenic Mycobacteria Showing Inducible Macrolide Resistance | Microbiology resource announcements. 2022 Apr 21;11(4):e0006022. | 35357161 | doi: 10.1128/mra.00060-22 |
| 50 | 佐藤 行人 | Yukuto Sato | Analysis of human clinical and environmental Leptospira to elucidate the eco-epidemiology of leptospirosis in Yaeyama, subtropical Japan. | PLoS Negl Trop Dis. 2022 Mar; 16(3): e0010234. | 35358181 | doi: 1371/journal.pntd.0010234 |
| 51 | 笠原 雅弘 | Masahiro Kasahara | LPMX: A pure rootless composable container system | BMC bioinformatics. 2022 Mar 31;23(1):112. | 35361130 | doi: 10.1186/s12859-022-04649-3 |
| 52 | 瀧 雄介 | Yusuke Taki | The Association Between Onset of Staphylococcal Non-menstrual Toxic Shock Syndrome With Inducibility of Toxic Shock Syndrome Toxin-1 Production | Frontiers in microbiology. 2022 Mar 14;13:765317. | 35369432 | doi: 10.3389/fmicb.2022.765317 |
| 53 | 吉武 和敏 | Kazutoshi Yoshitake | Construction of a chromosome-level Japanese stickleback species genome using ultra-dense linkage analysis with single-cell sperm sequencing. | NAR Genom Bioinform. 2022 Jun; 4(2): lqac026. | 35372836 | doi: 1093/nargab/lqac026 |
| 54 | 西井 かなえ | kanae nishii | The first genome for the Cape Primrose Streptocarpus rexii (Gesneriaceae), a model plant for studying meristem-driven shoot diversity. | Plant Direct. 2022 Apr; 6(4): e388. | 35388373 | doi: 1002/pld3.388 |
| 55 | 寺井 悟朗 | Goro Terai | QRNAstruct: a method for extracting secondary structural features of RNA via regression with biological activity. | Nucleic Acids Res. 2022 Jul 22; 50(13): e73. | 35390152 | doi: 1093/nar/gkac220 |
| 56 | 原 敏文 | Toshifumi Hara | Elevated METTL9 is associated with peritoneal dissemination in human scirrhous gastric cancers. | Biochem Biophys Rep. 2022 Jul; 30: 101255. | 35402738 | doi: 1016/j.bbrep.2022.101255 |
| 57 | 河口 真一 | Shinichi Kawaguchi | The Tudor Domain-Containing Protein, Kotsubu (CG9925), Localizes to the Nuage and Functions in piRNA Biogenesis in D. melanogaster. | Front Mol Biosci. 2022; 9: 818302. | 35425810 | doi: 3389/fmolb.2022.818302 |
| 58 | 吉 田 光範 | Mitsunori Yoshida | Molecular Epidemiological Characteristics of Mycobacterium abscessus Complex Derived from Non-Cystic Fibrosis Patients in Japan and Taiwan | Microbiology spectrum. 2022 Jun 29;10(3):e0057122. | 35446117 | doi: 10.1128/spectrum.00571-22 |
| 59 | 湯山 育子 | Ikuko Yuyama | Metatranscriptomic Analysis of Corals Inoculated With Tolerant and Non-Tolerant Symbiont Exposed to High Temperature and Light Stress. | Front Physiol. 2022; 13: 806171. | 35480050 | doi: 3389/fphys.2022.806171 |
| 60 | 奥野 友介 | Yusuke Okuno | EBV genome variations enhance clinicopathological features of nasopharyngeal carcinoma in a non-endemic region. | Cancer Sci. 2022 Jul; 113(7): 2446-2456. | 35485636 | doi: 1111/cas.15381 |
| 61 | 谷澤 靖洋 | Yasuhiro Tanizawa | Genome evolution of a nonparasitic secondary heterotroph, the diatom Nitzschia putrida. | Sci Adv. 2022 Apr 29; 8(17): eabi5075. | 35486731 | doi: 1126/sciadv.abi5075 |
| 62 | 大槻 朝 | Hajime Ohtsuki | Invasions of an obligate asexual daphnid species support the nearly neutral theory. | Sci Rep. 2022 May 04; 12(1): 7305. | 35508526 | doi: 1038/s41598-022-11218-4 |
| 63 | 岡田 俊平 | Shunpei Okadas | Regulation of A-to-I RNA editing and stop codon recoding to control selenoprotein expression during skeletal myogenesis. | Nat Commun. 2022 May 06; 13(1): 2503. | 35523818 | doi: 1038/s41467-022-30181-2 |
| 64 | 中岡 慎治 | Shinji Nakaoka | Evolving neural networks through bio-inspired parent selection in dynamic environments. | Biosystems. 2022 Aug; 218: 104686. | 35525435 | doi: 1016/j.biosystems.2022.104686 |
| 65 | 笠原 浩太 | Kota Kasahara | Information quantity for secondary structure propensities of protein subsequences in the Protein Data Bank | Biophysics and physicobiology. 2022 Feb 8;19:1-12. | 35532457 | doi: 10.2142/biophysico.bppb-v19.0002 |
| 66 | 水口 洋平, 豊田 敦 | Yohei Minakuchi, Atsushi Toyoda | Early embryonic mutations reveal dynamics of somatic and germ cell lineages in mice. | Genome Res. 2022 May; 32(5): 945-955. | 35534232 | doi: 1101/gr.276363.121 |
| 67 | 遠藤 明仁 | Akihito Endo | Extracellular fructooligosaccharide degradation in Anaerostipes hadrus for co-metabolism with non-fructooligosaccharide utilizers. | Biochem Biophys Res Commun. 2022 Jul 12; 613: 81-86. | 35537289 | doi: 1016/j.bbrc.2022.04.134 |
| 68 | 森 宙史, 西原 秀典 | Hiroshi Mori, Hidenori Nishihara | Paleogenomics reveals independent and hybrid origins of two morphologically distinct wolf lineages endemic to Japan. | Curr Biol. 2022 Jun 06; 32(11): 2494-2504.e5. | 35537455 | doi: 1016/j.cub.2022.04.034 |
| 69 | 井関 洸太朗 | kohtaro iseki | Variability of Flowering Sex and Its Effect on Agronomic Trait Expression in White Guinea Yam. | Front Plant Sci. 2022; 13: 837951. | 35548274 | doi: 3389/fpls.2022.837951 |
| 70 | 秋山 泰身 | Taishin Akiyama | Integrative analysis of scRNA-seq and scATAC-seq revealed transit-amplifying thymic epithelial cells expressing autoimmune regulator. | Elife. 2022 May 17; 11: e73998. | 35578835 | doi: 7554/eLife.73998 |
| 71 | 加藤 大明 | Hiroaki Kato | Recognition of pathogen-derived sphingolipids in Arabidopsis. | Science. 2022 May 20; 376(6595): 857-860. | 35587979 | doi: 1126/science.abn0650 |
| 72 | 齋藤 裕 | Yutaka Saito | AI and computational chemistry-accelerated development of an alotaketal analogue with conventional PKC selectivity. | Chem Commun (Camb). 2022 Jun 09; 58(47): 6693-6696. | 35608215 | doi: 1039/d2cc01759h |
| 73 | 新里 宙也 | Chuya Shinzato | Comparative genomics highlight the importance of lineage-specific gene families in evolutionary divergence of the coral genus, Montipora. | BMC Ecol Evol. 2022 May 27; 22(1): 71. | 35624412 | doi: 1186/s12862-022-02023-8 |
| 74 | 張 再軍 | Zaijun Zhang | Temporal and Locational Values of Images Affecting the Deep Learning of Cancer Stem Cell Morphology. | Biomedicines. 2022 Apr 19; 10(5): 941. | 35625678 | doi: 3390/biomedicines10050941 |
| 75 | 石川 麻乃 | Asano Ishikawa | Convergent copy number increase of genes associated with freshwater colonization in fishes | Philosophical transactions of the Royal Society of London. Series B, Biological sciences. 2022 Jul 18;377(1855):20200509. | 35634928 | doi: 10.1098/rstb.2020.0509 |
| 76 | 川瀬 雅貴, 一柳 健司 | Masaki Kawase, Kenji Ichiyanagi | The Expression Dynamics of piRNAs Derived From Male Germline piRNA Clusters and Retrotransposons. | Front Cell Dev Biol. 2022; 10: 868746. | 35646920 | doi: 3389/fcell.2022.868746 |
| 77 | 山本 泰智 | Yamamoto Yasunori | Online tools for efficient paper writing. | Hum Genome Var. 2022 Jun 06; 9(1): 20. | 35668068 | doi: 1038/s41439-022-00195-9 |
| 78 | 押木 守 | mamoru oshiki | Growth of nitrite-oxidizing Nitrospira and ammonia-oxidizing Nitrosomonas in marine recirculating trickling biofilter reactors. | Environ Microbiol. 2022 Aug; 24(8): 3735-3750. | 35672869 | doi: 1111/1462-2920.16085 |
| 79 | 山本 容正 | Yoshimasa Yamamoto | Fusion plasmid carrying the colistin resistance gene mcr of Escherichia coli isolated from healthy residents. | J Glob Antimicrob Resist. 2022 Sep; 30: 152-154. | 35705132 | doi: 1016/j.jgar.2022.06.007 |
| 80 | 鴻巣 明日香 | Asuka Kounosu | piRNA-like small RNAs target transposable elements in a Clade IV parasitic nematode. | Sci Rep. 2022 Jun 16; 12(1): 10156. | 35710810 | doi: 1038/s41598-022-14247-1 |
| 81 | 佐藤 賢二 | Kenji Satou | ProtTrans-Glutar: Incorporating Features From Pre-trained Transformer-Based Models for Predicting Glutarylation Sites. | Front Genet. 2022; 13: 885929. | 35711929 | doi: 3389/fgene.2022.885929 |
| 82 | 近藤 伸二 | Shinji Kondo | Nintedanib induces gene expression changes in the lung of induced-rheumatoid arthritis-associated interstitial lung disease mice. | PLoS One. 2022; 17(6): e0270056. | 35714115 | doi: 1371/journal.pone.0270056 |
| 83 | 藤井 雅史, 菊池 裕 | Masashi Fujii, Yutaka Kikuchi | Identification of aberrant transcription termination at specific gene loci with DNA hypomethylated transcription termination sites caused by DNA methyltransferase deficiency. | Genes Genet Syst. 2022 Oct 18; 97(3): 139-152. | 35718462 | doi: 1266/ggs.21-00092 |
| 84 | 塚本 雄也 | Yuta Tsukamoto | Mineralogical and Genomic Constraints on the Origin of Microbial Mn Oxide Formation in Complexed Microbial Community at the Terrestrial Hot Spring. | Life (Basel). 2022 May 30; 12(6): 816. | 35743847 | doi: 3390/life12060816 |
| 85 | 川崎 純菜 | Junna Kawasaki | Convergent evolution of antiviral machinery derived from endogenous retrovirus truncated envelope genes in multiple species. | Proc Natl Acad Sci U S A. 2022 Jun 28; 119(26): e2114441119. | 35749360 | doi: 1073/pnas.2114441119 |
| 86 | 藤井 雅史 | Masashi Fujii | Mathematical model of chromosomal dynamics during DNA double strand break repair in budding yeast. | Biophys Physicobiol. 2022; 19: 1-12. | 35749629 | doi: 2142/biophysico.bppb-v19.0012 |
| 87 | 吉田 圭佑 | Keisuke Yoshida | Priority effects shape the structure of infant-type Bifidobacterium communities on human milk oligosaccharides. | ISME J. 2022 Sep; 16(9): 2265-2279. | 35768643 | doi: 1038/s41396-022-01270-3 |
| 88 | 福永 津嵩, 岩崎 渉 | Tsukasa Fukunaga, Wataru Iwasaki | Mirage 2.0: fast and memory-efficient reconstruction of gene-content evolution considering heterogeneous evolutionary patterns among gene families. | Bioinformatics. 2022 Aug 10; 38(16): 4039-4041. | 35771653 | doi: 1093/bioinformatics/btac433 |
| 89 | 清水 元樹 | motoki shimizu | A genetically linked pair of NLR immune receptors shows contrasting patterns of evolution. | Proc Natl Acad Sci U S A. 2022 Jul 05; 119(27): e2116896119. | 35771942 | doi: 1073/pnas.2116896119 |
| 90 | 深井 英吾 | Eigo Fukai | Widespread and transgenerational retrotransposon activation in inter- and intraspecies recombinant inbred populations of Lotus japonicus. | Plant J. 2022 Sep; 111(5): 1397-14doi: | 35792830 | doi: 1111/tpj.15896 |
| 91 | 藤井 雅史 | Masashi Fujii | Epigenetic-structural changes in X chromosomes promote Xic pairing during early differentiation of mouse embryonic stem cells. | Biophys Physicobiol. 2022; 19: 1-14. | 35797402 | doi: 2142/biophysico.bppb-v19.0018 |
| 92 | 池田 秀也, 川島 秀一 | Shuya Ikeda, Shuichi Kawashima | TogoID: an exploratory ID converter to bridge biological datasets. | Bioinformatics. 2022 Sep 02; 38(17): 4194-4199. | 35801937 | doi: 1093/bioinformatics/btac491 |
| 93 | 宮路 直実 | Naomi Miyaji | Whole-Genome DNA Methylation Analysis in Brassica rapa subsp. perviridis in Response to Albugo candida Infection. | Front Plant Sci. 2022; 13: 849358. | 35812966 | doi: 3389/fpls.2022.849358 |
| 94 | 久保 貴彦 | Takahiko Kubo | Whole-Genome Sequencing of Rice Mutant Library Members Induced by N-Methyl-N-Nitrosourea Mutagenesis of Fertilized Egg Cells. | Rice (N Y). 2022 Jul 16; 15(1): 38. | 35841399 | doi: 1186/s12284-022-00585-1 |
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